Literature DB >> 25671656

Rapid evaporative ionization mass spectrometry imaging platform for direct mapping from bulk tissue and bacterial growth media.

Ottmar Golf1, Nicole Strittmatter, Tamas Karancsi, Steven D Pringle, Abigail V M Speller, Anna Mroz, James M Kinross, Nima Abbassi-Ghadi, Emrys A Jones, Zoltan Takats.   

Abstract

Rapid evaporative ionization mass spectrometry (REIMS) technology allows real time intraoperative tissue classification and the characterization and identification of microorganisms. In order to create spectral libraries for training the classification models, reference data need to be acquired in large quantities as classification accuracy generally improves as a function of number of training samples. In this study, we present an automated high-throughput method for collecting REIMS data from heterogeneous organic tissue. The underlying instrumentation consists of a 2D stage with an additional high-precision z-axis actuator that is equipped with an electrosurgical diathermy-based sampling probe. The approach was validated using samples of human liver with metastases and bacterial strains, cultured on solid medium, belonging to the species P. aeruginosa, B. subtilis, and S. aureus. For both sample types, spatially resolved spectral information was obtained that resulted in clearly distinguishable multivariate clustering between the healthy/cancerous liver tissues and between the bacterial species.

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Year:  2015        PMID: 25671656     DOI: 10.1021/ac5046752

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  16 in total

1.  Metabolomics technology and bioinformatics for precision medicine.

Authors:  Rajeev K Azad; Vladimir Shulaev
Journal:  Brief Bioinform       Date:  2019-11-27       Impact factor: 11.622

Review 2.  Rapid ex vivo molecular fingerprinting of biofluids using laser-assisted rapid evaporative ionization mass spectrometry.

Authors:  Vera Plekhova; Lieven Van Meulebroek; Marilyn De Graeve; Alvaro Perdones-Montero; Margot De Spiegeleer; Ellen De Paepe; Emma Van de Walle; Zoltan Takats; Simon J S Cameron; Lynn Vanhaecke
Journal:  Nat Protoc       Date:  2021-08-02       Impact factor: 13.491

3.  Calling all hosts: Bacterial communication in situ.

Authors:  Jessica L Cleary; Alanna R Condren; Katherine E Zink; Laura M Sanchez
Journal:  Chem       Date:  2017-03-09       Impact factor: 22.804

Review 4.  Unsupervised machine learning for exploratory data analysis in imaging mass spectrometry.

Authors:  Nico Verbeeck; Richard M Caprioli; Raf Van de Plas
Journal:  Mass Spectrom Rev       Date:  2019-10-11       Impact factor: 10.946

5.  Detection of Metastatic Breast and Thyroid Cancer in Lymph Nodes by Desorption Electrospray Ionization Mass Spectrometry Imaging.

Authors:  Jialing Zhang; Clara L Feider; Chandandeep Nagi; Wendong Yu; Stacey A Carter; James Suliburk; Hop S Tran Cao; Livia S Eberlin
Journal:  J Am Soc Mass Spectrom       Date:  2017-02-28       Impact factor: 3.109

6.  Clinical Application of Ambient Ionization Mass Spectrometry.

Authors:  Li-Hua Li; Hua-Yi Hsieh; Cheng-Chih Hsu
Journal:  Mass Spectrom (Tokyo)       Date:  2017-02-24

Review 7.  Mass spectrometry imaging to detect lipid biomarkers and disease signatures in cancer.

Authors:  Matthias Holzlechner; Eliseo Eugenin; Brendan Prideaux
Journal:  Cancer Rep (Hoboken)       Date:  2019-12

8.  Training in metabolomics research. II. Processing and statistical analysis of metabolomics data, metabolite identification, pathway analysis, applications of metabolomics and its future.

Authors:  Stephen Barnes; H Paul Benton; Krista Casazza; Sara J Cooper; Xiangqin Cui; Xiuxia Du; Jeffrey Engler; Janusz H Kabarowski; Shuzhao Li; Wimal Pathmasiri; Jeevan K Prasain; Matthew B Renfrow; Hemant K Tiwari
Journal:  J Mass Spectrom       Date:  2016-08       Impact factor: 1.982

9.  Laser-assisted rapid evaporative ionisation mass spectrometry (LA-REIMS) as a metabolomics platform in cervical cancer screening.

Authors:  Maria Paraskevaidi; Simon J S Cameron; Eilbhe Whelan; Sarah Bowden; Menelaos Tzafetas; Anita Mitra; Anita Semertzidou; Antonis Athanasiou; Phillip R Bennett; David A MacIntyre; Zoltan Takats; Maria Kyrgiou
Journal:  EBioMedicine       Date:  2020-09-25       Impact factor: 8.143

Review 10.  Ambient Ionization Mass Spectrometry for Cancer Diagnosis and Surgical Margin Evaluation.

Authors:  Demian R Ifa; Livia S Eberlin
Journal:  Clin Chem       Date:  2015-11-10       Impact factor: 8.327

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