Literature DB >> 25671554

Excited-state relaxation of hydrated thymine and thymidine measured by liquid-jet photoelectron spectroscopy: experiment and simulation.

Franziska Buchner1, Akira Nakayama, Shohei Yamazaki, Hans-Hermann Ritze, Andrea Lübcke.   

Abstract

Time-resolved photoelectron spectroscopy is performed on thymine and thymidine in aqueous solution to study the excited-state relaxation dynamics of these molecules. We find two contributions with sub-ps lifetimes in line with recent excited-state QM/MM molecular dynamics simulations (J. Chem. Phys. 2013, 139, 214304). The temporal evolution of ionization energies for the excited ππ* state along the QM/MM molecular dynamics trajectories were calculated and are compatible with experimental results, where the two contributions correspond to the relaxation paths in the ππ* state involving different conical intersections with the ground state. Theoretical calculations also show that ionization from the nπ* state is possible at the given photon energies, but we have not found any experimental indication for signal from the nπ* state. In contrast to currently accepted relaxation mechanisms, we suggest that the nπ* state is not involved in the relaxation process of thymine in aqueous solution.

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Year:  2015        PMID: 25671554     DOI: 10.1021/ja511108u

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  5 in total

1.  Conformational polymorphism or structural invariance in DNA photoinduced lesions: implications for repair rates.

Authors:  François Dehez; Hugo Gattuso; Emmanuelle Bignon; Christophe Morell; Elise Dumont; Antonio Monari
Journal:  Nucleic Acids Res       Date:  2017-04-20       Impact factor: 16.971

2.  How Does Thymine DNA Survive Ultrafast Dimerization Damage?

Authors:  Hongjuan Wang; Xuebo Chen
Journal:  Molecules       Date:  2016-12-31       Impact factor: 4.411

3.  Photoelectron Spectroscopy of Liquid Water with Tunable Extreme-Ultraviolet Radiation: Effects of Electron Scattering.

Authors:  Conaill F Perry; Inga Jordan; Pengju Zhang; Aaron von Conta; Fernanda B Nunes; Hans Jakob Wörner
Journal:  J Phys Chem Lett       Date:  2021-03-18       Impact factor: 6.475

4.  Tracking excited state decay mechanisms of pyrimidine nucleosides in real time.

Authors:  Rocío Borrego-Varillas; Artur Nenov; Piotr Kabaciński; Irene Conti; Lucia Ganzer; Aurelio Oriana; Vishal Kumar Jaiswal; Ines Delfino; Oliver Weingart; Cristian Manzoni; Ivan Rivalta; Marco Garavelli; Giulio Cerullo
Journal:  Nat Commun       Date:  2021-12-14       Impact factor: 14.919

5.  Accurate Vertical Ionization Energy of Water and Retrieval of True Ultraviolet Photoelectron Spectra of Aqueous Solutions.

Authors:  Michael S Scholz; William G Fortune; Omri Tau; Helen H Fielding
Journal:  J Phys Chem Lett       Date:  2022-07-21       Impact factor: 6.888

  5 in total

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