Literature DB >> 25665506

Codon optimization of genes for efficient protein expression in mammalian cells by selection of only preferred human codons.

Satoshi Inouye1, Yuiko Sahara-Miura2, Jun-ichi Sato2, Takahiro Suzuki3.   

Abstract

A simple design method for codon optimization of genes to express a heterologous protein in mammalian cells is described. Codon optimization was performed by choosing only codons preferentially used in humans and with over 60% GC content, and the method was named the "preferred human codon-optimized method." To test our simple rule for codon optimization, the preferred human codon-optimized genes for six proteins containing photoproteins (aequorin and clytin II) and luciferases (Gaussia luciferase, Renilla luciferase, and firefly luciferases from Photinus pyralis and Luciola cruciata) were chemically synthesized and transiently expressed in Chinese hamster ovary-K1 cells. All preferred human codon-optimized genes showed higher luminescence activity than the corresponding wild-type genes. Our simple design method could be used to improve protein expression in mammalian cells efficiently.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Codon optimization; Luciferase; Photoprotein; Reporter gene; Synthetic gene

Mesh:

Substances:

Year:  2015        PMID: 25665506     DOI: 10.1016/j.pep.2015.02.002

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  15 in total

1.  Optimizing assembly and production of native bispecific antibodies by codon de-optimization.

Authors:  Giovanni Magistrelli; Yves Poitevin; Florence Schlosser; Guillemette Pontini; Pauline Malinge; Soheila Josserand; Marie Corbier; Nicolas Fischer
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Review 2.  Decoding mechanisms by which silent codon changes influence protein biogenesis and function.

Authors:  Vedrana Bali; Zsuzsanna Bebok
Journal:  Int J Biochem Cell Biol       Date:  2015-03-26       Impact factor: 5.085

3.  An evolutionary approach to optimizing glucose-6-phosphatase-α enzymatic activity for gene therapy of glycogen storage disease type Ia.

Authors:  Lisa Zhang; Jun-Ho Cho; Irina Arnaoutova; Brian C Mansfield; Janice Y Chou
Journal:  J Inherit Metab Dis       Date:  2019-02-22       Impact factor: 4.982

4.  BAX 335 hemophilia B gene therapy clinical trial results: potential impact of CpG sequences on gene expression.

Authors:  Barbara A Konkle; Christopher E Walsh; Miguel A Escobar; Neil C Josephson; Guy Young; Annette von Drygalski; Scott W J McPhee; R Jude Samulski; Ivan Bilic; Maurus de la Rosa; Birgit M Reipert; Hanspeter Rottensteiner; Friedrich Scheiflinger; John C Chapin; Bruce Ewenstein; Paul E Monahan
Journal:  Blood       Date:  2021-02-11       Impact factor: 22.113

5.  Restoration of Functional Full-Length Dystrophin After Intramuscular Transplantation of Foamy Virus-Transduced Myoblasts.

Authors:  Jinhong Meng; Nathan Paul Sweeney; Bruno Doreste; Francesco Muntoni; Myra McClure; Jennifer Morgan
Journal:  Hum Gene Ther       Date:  2020-01-10       Impact factor: 5.695

6.  Optimized lentiviral vector to restore full-length dystrophin via a cell-mediated approach in a mouse model of Duchenne muscular dystrophy.

Authors:  Jinhong Meng; Marc Moore; John Counsell; Francesco Muntoni; Linda Popplewell; Jennifer Morgan
Journal:  Mol Ther Methods Clin Dev       Date:  2022-05-02       Impact factor: 5.849

7.  Video-Rate Bioluminescence Imaging of Degranulation of Mast Cells Attached to the Extracellular Matrix.

Authors:  Satoru Yokawa; Takahiro Suzuki; Ayumi Hayashi; Satoshi Inouye; Yoshikazu Inoh; Tadahide Furuno
Journal:  Front Cell Dev Biol       Date:  2018-07-10

8.  β-arrestin-2 in PAR-1-biased signaling has a crucial role in endothelial function via PDGF-β in stroke.

Authors:  Hideaki Kanki; Tsutomu Sasaki; Shigenobu Matsumura; Satoru Yokawa; Toshiro Yukami; Munehisa Shimamura; Manabu Sakaguchi; Tadahide Furuno; Takahiro Suzuki; Hideki Mochizuki
Journal:  Cell Death Dis       Date:  2019-02-04       Impact factor: 8.469

9.  Identification of a DYRK1A Inhibitor that Induces Degradation of the Target Kinase using Co-chaperone CDC37 fused with Luciferase nanoKAZ.

Authors:  Rie Sonamoto; Isao Kii; Yuka Koike; Yuto Sumida; Tomoe Kato-Sumida; Yukiko Okuno; Takamitsu Hosoya; Masatoshi Hagiwara
Journal:  Sci Rep       Date:  2015-08-03       Impact factor: 4.379

10.  GC Content of Early Metazoan Genes and Its Impact on Gene Expression Levels in Mammalian Cell Lines.

Authors:  Ismail Sahin Gul; Jens Staal; Paco Hulpiau; Evi De Keuckelaere; Kai Kamm; Tom Deroo; Ellen Sanders; Katrien Staes; Yasmine Driege; Yvan Saeys; Rudi Beyaert; Ulrich Technau; Bernd Schierwater; Frans van Roy
Journal:  Genome Biol Evol       Date:  2018-03-01       Impact factor: 3.416

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