Literature DB >> 25664799

Crystallization and preliminary X-ray diffraction studies of the family 54 carbohydrate-binding module from laminarinase (β-1,3-glucanase) Lic16A of Clostridium thermocellum.

Yury A Kislitsyn1, Valeriya R Samygina1, Igor A Dvortsov2, Nataliya A Lunina2, Inna P Kuranova1, Galina A Velikodvorskaya2.   

Abstract

The crystallization and preliminary X-ray diffraction analysis of the carbohydrate-binding module (CBM) from laminarinase Lic16A of the hyperthermophilic anaerobic bacterium Clostridium thermocellum (ctCBM54) are reported. Recombinant ctCBM54 was prepared using an Escherichia coli/pQE30 overexpression system and was crystallized by the hanging-drop vapour-diffusion method. X-ray diffraction data were collected to 2.1 Å resolution using synchrotron radiation. The crystals belonged to space group P6322, with unit-cell parameters a = b = 130.15, c = 131.05 Å. The three-dimensional structure of ctCBM54 will provide valuable information about the structure-function relation of the laminarinase Lic16A and will allow the exploitation of this binding module in biotechnological applications.

Entities:  

Keywords:  Clostridium thermocellum; Lic16A; carbohydrate-binding module; β-1,3-glucanase

Mesh:

Substances:

Year:  2015        PMID: 25664799      PMCID: PMC4321479          DOI: 10.1107/S2053230X15000539

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  16 in total

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Journal:  Structure       Date:  2004-07       Impact factor: 5.006

2.  Highly thermostable endo-1,3-beta-glucanase (laminarinase) LamA from Thermotoga neapolitana: nucleotide sequence of the gene and characterization of the recombinant gene product.

Authors:  Vladimir V Zverlov; Ilia Y Volkov; Tatjana V Velikodvorskaya; Wolfgang H Schwarz
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3.  The binding pattern of two carbohydrate-binding modules of laminarinase Lam16A from Thermotoga neapolitana: differences in beta-glucan binding within family CBM4.

Authors:  Vladimir V Zverlov; Ilia Y Volkov; Galina A Velikodvorskaya; Wolfgang H Schwarz
Journal:  Microbiology       Date:  2001-03       Impact factor: 2.777

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

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Review 6.  Micro and macroalgal biomass: a renewable source for bioethanol.

Authors:  Rojan P John; G S Anisha; K Madhavan Nampoothiri; Ashok Pandey
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7.  Determination of xylanase, beta-glucanase, and cellulase activity.

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Journal:  Anal Bioanal Chem       Date:  2002-07-30       Impact factor: 4.142

8.  Tertiary structure and carbohydrate recognition by the chitin-binding domain of a hyperthermophilic chitinase from Pyrococcus furiosus.

Authors:  Tsutomu Nakamura; Shouhei Mine; Yoshihisa Hagihara; Kazuhiko Ishikawa; Takahisa Ikegami; Koichi Uegaki
Journal:  J Mol Biol       Date:  2008-06-10       Impact factor: 5.469

Review 9.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

10.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  1 in total

1.  Crystal Structure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery.

Authors:  Takafumi Itoh; Takao Hibi; Fumiko Suzuki; Ikumi Sugimoto; Akihiro Fujiwara; Koji Inaka; Hiroaki Tanaka; Kazunori Ohta; Yutaka Fujii; Akira Taketo; Hisashi Kimoto
Journal:  PLoS One       Date:  2016-12-01       Impact factor: 3.240

  1 in total

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