Literature DB >> 25664793

Preliminary X-ray crystallographic analysis of an engineered variant of human chimera-type galectin-3 with a shortened N-terminal domain.

Andrea Flores-Ibarra1, Federico M Ruiz1, Sabine Vértesy2, Sabine André2, Hans-Joachim Gabius2, Antonio Romero1.   

Abstract

How lectins translate sugar-encoded information into cellular effects not only depends on glycan recognition. Other domains of the protein can contribute to the functional profile of a lectin. Human galectin-3 (Gal-3), an adhesion/growth-regulatory galectin, is composed of three different domains and is thus called a chimera-type protein. In addition to the carbohydrate-recognition domain, this lectin encompasses an N-terminal domain consisting of a peptide harbouring two phosphorylation sites and nine non-triple-helical collagen-like repeats. This region plays an as yet structurally undefined role in Gal-3 aggregation and ligand recognition. To date, crystallization of full-length Gal-3 has not been achieved. With the aim of providing structural insights into this modular organization, a Gal-3 variant was crystallized maintaining the terminal peptide and three of the nine collagen-like repeats. The crystals belonged to the orthorhombic space group P212121, with unit-cell parameters a = 94.04, b = 97.96, c = 236.20 Å, and diffracted to a resolution of 3.3 Å.

Entities:  

Keywords:  collagen; galectin-3; glycome; lipopolysaccharide

Mesh:

Substances:

Year:  2015        PMID: 25664793      PMCID: PMC4321473          DOI: 10.1107/S2053230X15000023

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  24 in total

1.  Homodimeric galectin-7 (p53-induced gene 1) is a negative growth regulator for human neuroblastoma cells.

Authors:  Jürgen Kopitz; Sabine André; Carolina von Reitzenstein; Kees Versluis; Herbert Kaltner; Roland J Pieters; Kojiro Wasano; Ichiro Kuwabara; Fu-Tong Liu; Michael Cantz; Albert J R Heck; Hans-Joachim Gabius
Journal:  Oncogene       Date:  2003-09-18       Impact factor: 9.867

2.  Hydrodynamic properties of human adhesion/growth-regulatory galectins studied by fluorescence correlation spectroscopy.

Authors:  Antonia Göhler; Sabine André; Herbert Kaltner; Markus Sauer; Hans-Joachim Gabius; Sören Doose
Journal:  Biophys J       Date:  2010-06-16       Impact factor: 4.033

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  Galectin-3 precipitates as a pentamer with synthetic multivalent carbohydrates and forms heterogeneous cross-linked complexes.

Authors:  Nisar Ahmad; Hans-J Gabius; Sabine André; Herbert Kaltner; Subramanian Sabesan; René Roy; Bingcan Liu; Frank Macaluso; C Fred Brewer
Journal:  J Biol Chem       Date:  2003-12-12       Impact factor: 5.157

5.  The growing galectin network in colon cancer and clinical relevance of cytoplasmic galectin-3 reactivity.

Authors:  Heather Dawson; Sabine André; Eva Karamitopoulou; Inti Zlobec; Hans-Joachim Gabius
Journal:  Anticancer Res       Date:  2013-08       Impact factor: 2.480

6.  Peptides derived from human galectin-3 N-terminal tail interact with its carbohydrate recognition domain in a phosphorylation-dependent manner.

Authors:  M Álvaro Berbís; Sabine André; F Javier Cañada; Rüdiger Pipkorn; Hans Ippel; Kevin H Mayo; Dieter Kübler; Hans-Joachim Gabius; Jesús Jiménez-Barbero
Journal:  Biochem Biophys Res Commun       Date:  2013-11-22       Impact factor: 3.575

7.  Tumor suppressor p16INK4a--modulator of glycomic profile and galectin-1 expression to increase susceptibility to carbohydrate-dependent induction of anoikis in pancreatic carcinoma cells.

Authors:  Sabine André; Hugo Sanchez-Ruderisch; Hiroaki Nakagawa; Malte Buchholz; Jürgen Kopitz; Pia Forberich; Wolfgang Kemmner; Corina Böck; Kisaburo Deguchi; Katharia M Detjen; Bertram Wiedenmann; Magnus von Knebel Doeberitz; Thomas M Gress; Shin-Ichiro Nishimura; Stefan Rosewicz; Hans-Joachim Gabius
Journal:  FEBS J       Date:  2007-05-29       Impact factor: 5.542

8.  How good are my data and what is the resolution?

Authors:  Philip R Evans; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

9.  An introduction to data reduction: space-group determination, scaling and intensity statistics.

Authors:  Philip R Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  3 in total

1.  Intra- and intermolecular interactions of human galectin-3: assessment by full-assignment-based NMR.

Authors:  Hans Ippel; Michelle C Miller; Sabine Vértesy; Yi Zheng; F Javier Cañada; Dennis Suylen; Kimiko Umemoto; Cecilia Romanò; Tilman Hackeng; Guihua Tai; Hakon Leffler; Jürgen Kopitz; Sabine André; Dieter Kübler; Jesús Jiménez-Barbero; Stefan Oscarson; Hans-Joachim Gabius; Kevin H Mayo
Journal:  Glycobiology       Date:  2016-02-23       Impact factor: 4.313

2.  Crystallization of a human galectin-3 variant with two ordered segments in the shortened N-terminal tail.

Authors:  Andrea Flores-Ibarra; Sabine Vértesy; Francisco J Medrano; Hans-Joachim Gabius; Antonio Romero
Journal:  Sci Rep       Date:  2018-06-29       Impact factor: 4.379

3.  Galectin-related protein: An integral member of the network of chicken galectins 1. From strong sequence conservation of the gene confined to vertebrates to biochemical characteristics of the chicken protein and its crystal structure.

Authors:  Gabriel García Caballero; Andrea Flores-Ibarra; Malwina Michalak; Nailya Khasbiullina; Nicolai V Bovin; Sabine André; Joachim C Manning; Sabine Vértesy; Federico M Ruiz; Herbert Kaltner; Jürgen Kopitz; Antonio Romero; Hans-Joachim Gabius
Journal:  Biochim Biophys Acta       Date:  2016-06-03
  3 in total

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