Literature DB >> 25662193

In situ localization of (GATA)n and (TTAGGG)n repeated DNAs and W sex chromosome differentiation in Parodontidae (Actinopterygii: Characiformes).

Kaline Ziemniczak1, Josiane B Traldi, Viviane Nogaroto, Mara C Almeida, Roberto F Artoni, Orlando Moreira-Filho, Marcelo R Vicari.   

Abstract

The family Parodontidae presents a conserved diploid number of 54 chromosomes and different stages associated with ZW sex chromosome differentiation. For the great majority of species in this family it was proposed that the karyotypic diversification is mostly due to repetitive DNA mobility and accumulation. In this study, 2 repetitive probes, (GATA)n and (TTAGGG)n, were used to assess probable mechanisms of chromosome diversification, especially those related to molecular differentiation of the W chromosome. Results showed that the (GATA)n sequence is involved in the differentiation of the W chromosome female-specific region of Parodontidae and that it is accumulated in diverse autosomes. The (TTAGGG)n repeat is part of the vertebrate telomere, and the presence of interstitial telomeric sites may help to identify chromosome rearrangements. However, in Parodontidae, no interstitial telomeric sites were detected. This study shows plasticity in the amount of the (GATA)n repeat in Parodontidae that may be involved in chromatin modifications and transcriptional control of the W chromosome, and the role of repetitive DNAs in genomic diversification in this fish family is discussed.

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Year:  2015        PMID: 25662193     DOI: 10.1159/000370297

Source DB:  PubMed          Journal:  Cytogenet Genome Res        ISSN: 1424-8581            Impact factor:   1.636


  3 in total

1.  DNA transposon invasion and microsatellite accumulation guide W chromosome differentiation in a Neotropical fish genome.

Authors:  Michelle Orane Schemberger; Viviane Demetrio Nascimento; Rafael Coan; Érica Ramos; Viviane Nogaroto; Kaline Ziemniczak; Guilherme Targino Valente; Orlando Moreira-Filho; Cesar Martins; Marcelo Ricardo Vicari
Journal:  Chromosoma       Date:  2019-08-27       Impact factor: 4.316

Review 2.  The karyotypes and evolution of ZZ/ZW sex chromosomes in the genus Characidium (Characiformes, Crenuchidae).

Authors:  Marcela Baer Pucci; Viviane Nogaroto; Luiz Antonio Carlos Bertollo; Marcelo Ricardo Vicari
Journal:  Comp Cytogenet       Date:  2018-10-02       Impact factor: 1.800

3.  Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis.

Authors:  Kevin Santos da Silva; Larissa Glugoski; Marcelo Ricardo Vicari; Augusto César Paes de Souza; Renata Coelho Rodrigues Noronha; Julio Cesar Pieczarka; Cleusa Yoshiko Nagamachi
Journal:  Front Genet       Date:  2022-03-24       Impact factor: 4.599

  3 in total

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