Literature DB >> 25661715

An overview of the genus Glyphium and its phylogenetic placement in Patellariales.

Eric W A Boehm1, Guy Marson2, Geir H Mathiassen3, Alain Gardiennet4, Conrad L Schoch5.   

Abstract

Glyphium encompasses species with erect, carbonaceous ligulate to dolabrate ascomata that are strongly laterally compressed and dehisce along a longitudinal slit. The five currently recognized members of the genus are separated primarily by whether the ascospores disassociate into part-spores within the ascus. Glyphium has traditionally been placed in Mytilinidiaceae (Mytilinidiales, Pleosporomycetidae, Dothideomycetes). The present study, based on freshly collected material of G. elatum and G. grisonense, was initiated to determine the phylogenetic placement of Glyphium. Phylogenies inferred from the analysis of sequences of six gene regions (nuLSU, nuSSU, mtSSU, TEF1, RPB1, RPB2) derived from six accessions indicate that Glyphium belongs to Patellariales (Pleosporomycetidae, Dothideomycetes). Our phylogenies also support the phylogenetic relationship of Patellaria and Hysteropatella within this order. The nomenclatural history of Glyphium is summarized and a key to species is provided.
© 2015 by The Mycological Society of America.

Entities:  

Keywords:  Bayesian; Patellariaceae; maximum likelihood; multigene phylogeny

Mesh:

Substances:

Year:  2015        PMID: 25661715      PMCID: PMC4495917          DOI: 10.3852/14-191

Source DB:  PubMed          Journal:  Mycologia        ISSN: 0027-5514            Impact factor:   2.696


  17 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

3.  On the evolution of the Hysteriaceae and Mytilinidiaceae (Pleosporomycetidae, Dothideomycetes, Ascomycota) using four nuclear genes.

Authors:  Eric W A Boehm; Conrad L Schoch; Joseph W Spatafora
Journal:  Mycol Res       Date:  2009-04

4.  Multiple alignment of DNA sequences with MAFFT.

Authors:  Kazutaka Katoh; George Asimenos; Hiroyuki Toh
Journal:  Methods Mol Biol       Date:  2009

5.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

6.  Rapid and accurate large-scale coestimation of sequence alignments and phylogenetic trees.

Authors:  Kevin Liu; Sindhu Raghavan; Serita Nelesen; C Randal Linder; Tandy Warnow
Journal:  Science       Date:  2009-06-19       Impact factor: 47.728

7.  A molecular phylogenetic reappraisal of the Hysteriaceae, Mytilinidiaceae and Gloniaceae (Pleosporomycetidae, Dothideomycetes) with keys to world species.

Authors:  E W A Boehm; G K Mugambi; A N Miller; S M Huhndorf; S Marincowitz; J W Spatafora; C L Schoch
Journal:  Stud Mycol       Date:  2009       Impact factor: 16.097

8.  Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species.

Authors:  R Vilgalys; M Hester
Journal:  J Bacteriol       Date:  1990-08       Impact factor: 3.490

9.  Novel evolutionary lineages revealed in the Chaetothyriales (fungi) based on multigene phylogenetic analyses and comparison of its secondary structure.

Authors:  Martina Réblová; Wendy A Untereiner; Kamila Réblová
Journal:  PLoS One       Date:  2013-05-28       Impact factor: 3.240

10.  A rock-inhabiting ancestor for mutualistic and pathogen-rich fungal lineages.

Authors:  C Gueidan; C R Villaseñor; G S de Hoog; A A Gorbushina; W A Untereiner; F Lutzoni
Journal:  Stud Mycol       Date:  2008       Impact factor: 16.097

View more
  3 in total

1.  Hidden diversity in Thyridaria and a new circumscription of the Thyridariaceae.

Authors:  W M Jaklitsch; H Voglmayr
Journal:  Stud Mycol       Date:  2016-09-23       Impact factor: 16.097

2.  Asterodiscus and Stigmatodiscus, two new apothecial dothideomycete genera and the new order Stigmatodiscales.

Authors:  Hermann Voglmayr; Alain Gardiennet; Walter M Jaklitsch
Journal:  Fungal Divers       Date:  2016-02-02       Impact factor: 20.372

3.  Stigmatodiscus pruni, a new dothideomycete with hysteriform ascomata.

Authors:  Hermann Voglmayr; Jacques Fournier; Walter M Jaklitsch
Journal:  Sydowia       Date:  2016-12-13
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.