Literature DB >> 25661093

'Latent drivers' expand the cancer mutational landscape.

Ruth Nussinov1, Chung-Jung Tsai2.   

Abstract

A major challenge facing the community involves identification of mutations that drive cancer. Analyses of cancer genomes to detect, and distinguish, 'driver' from 'passenger' mutations are daunting tasks. Here we suggest that there is a third 'latent driver' category. 'Latent driver' mutations behave as passengers, and do not confer a cancer hallmark. However, coupled with other emerging mutations, they drive cancer development and drug resistance. 'Latent drivers' emerge prior to and during cancer evolution. These allosteric mutations can work through 'AND' all-or-none or incremental 'Graded' logic gate mechanisms. Current diagnostic platforms generally assume that actionable 'driver' mutations are those appearing most frequently in cancer. We propose that 'latent driver' detection may help forecast cancer progression and modify personalized drug regimes.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 25661093     DOI: 10.1016/j.sbi.2015.01.004

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  31 in total

Review 1.  The NF1 somatic mutational landscape in sporadic human cancers.

Authors:  Charlotte Philpott; Hannah Tovell; Ian M Frayling; David N Cooper; Meena Upadhyaya
Journal:  Hum Genomics       Date:  2017-06-21       Impact factor: 4.639

Review 2.  Integration of structural dynamics and molecular evolution via protein interaction networks: a new era in genomic medicine.

Authors:  Avishek Kumar; Brandon M Butler; Sudhir Kumar; S Banu Ozkan
Journal:  Curr Opin Struct Biol       Date:  2015-12-09       Impact factor: 6.809

3.  Comparison of algorithms for the detection of cancer drivers at subgene resolution.

Authors:  Eduard Porta-Pardo; Atanas Kamburov; David Tamborero; Tirso Pons; Daniela Grases; Alfonso Valencia; Nuria Lopez-Bigas; Gad Getz; Adam Godzik
Journal:  Nat Methods       Date:  2017-07-17       Impact factor: 28.547

4.  The Damaging Effect of Passenger Mutations on Cancer Progression.

Authors:  Christopher D McFarland; Julia A Yaglom; Jonathan W Wojtkowiak; Jacob G Scott; David L Morse; Michael Y Sherman; Leonid A Mirny
Journal:  Cancer Res       Date:  2017-05-23       Impact factor: 12.701

5.  The Role of Conformational Dynamics and Allostery in the Disease Development of Human Ferritin.

Authors:  Avishek Kumar; Tyler J Glembo; S Banu Ozkan
Journal:  Biophys J       Date:  2015-08-06       Impact factor: 4.033

6.  AlloSigMA 2: paving the way to designing allosteric effectors and to exploring allosteric effects of mutations.

Authors:  Zhen Wah Tan; Enrico Guarnera; Wei-Ven Tee; Igor N Berezovsky
Journal:  Nucleic Acids Res       Date:  2020-07-02       Impact factor: 16.971

Review 7.  Anticancer drug resistance: An update and perspective.

Authors:  Ruth Nussinov; Chung-Jung Tsai; Hyunbum Jang
Journal:  Drug Resist Updat       Date:  2021-12-16       Impact factor: 18.500

Review 8.  PI3K Driver Mutations: A Biophysical Membrane-Centric Perspective.

Authors:  Mingzhen Zhang; Hyunbum Jang; Ruth Nussinov
Journal:  Cancer Res       Date:  2020-10-12       Impact factor: 13.312

9.  Specific cancer-associated mutations in the switch III region of Ras increase tumorigenicity by nanocluster augmentation.

Authors:  Maja Šolman; Alessio Ligabue; Olga Blaževitš; Alok Jaiswal; Yong Zhou; Hong Liang; Benoit Lectez; Kari Kopra; Camilo Guzmán; Harri Härmä; John F Hancock; Tero Aittokallio; Daniel Abankwa
Journal:  Elife       Date:  2015-08-14       Impact factor: 8.140

10.  The RNA-binding protein LARP4 regulates cancer cell migration and invasion.

Authors:  Shailaja Seetharaman; Ella Flemyng; Jiazhen Shen; Maria R Conte; Anne J Ridley
Journal:  Cytoskeleton (Hoboken)       Date:  2016-09-26
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