Literature DB >> 25659023

Origin of metastable knots in single flexible chains.

Liang Dai1, C Benjamin Renner2, Patrick S Doyle3.   

Abstract

Recent theoretical progress has explained the physics of knotting of semiflexible polymers, yet knotting of flexible polymers is relatively unexplored. We herein develop a new theory for the size distribution of knots on a flexible polymer and the existence of metastable knots. We show the free energy of a flexible molecule in a tube can be mapped to quantitatively reproduce the free energy distribution of a knot on a flexible chain. The size distribution of knots on flexible chains is expected to be universal and might be observed at a macroscopic scale, such as a string of hard balls.

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Year:  2015        PMID: 25659023     DOI: 10.1103/PhysRevLett.114.037801

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  4 in total

1.  KymoKnot: A web server and software package to identify and locate knots in trajectories of linear or circular polymers.

Authors:  Luca Tubiana; Guido Polles; Enzo Orlandini; Cristian Micheletti
Journal:  Eur Phys J E Soft Matter       Date:  2018-06-07       Impact factor: 1.890

2.  Physical Links: defining and detecting inter-chain entanglement.

Authors:  Michele Caraglio; Cristian Micheletti; Enzo Orlandini
Journal:  Sci Rep       Date:  2017-04-25       Impact factor: 4.379

3.  A nanofluidic knot factory based on compression of single DNA in nanochannels.

Authors:  Susan Amin; Ahmed Khorshid; Lili Zeng; Philip Zimny; Walter Reisner
Journal:  Nat Commun       Date:  2018-04-17       Impact factor: 14.919

4.  An Anisotropic Effective Model for the Simulation of Semiflexible Ring Polymers.

Authors:  Peter Poier; Christos N Likos; Angel J Moreno; Ronald Blaak
Journal:  Macromolecules       Date:  2015-07-10       Impact factor: 5.985

  4 in total

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