Literature DB >> 25658505

A comparative analysis of DBSCAN, K-means, and quadratic variation algorithms for automatic identification of swallows from swallowing accelerometry signals.

Joshua M Dudik1, Atsuko Kurosu2, James L Coyle3, Ervin Sejdić4.   

Abstract

BACKGROUND: Cervical auscultation with high resolution sensors is currently under consideration as a method of automatically screening for specific swallowing abnormalities. To be clinically useful without human involvement, any devices based on cervical auscultation should be able to detect specified swallowing events in an automatic manner.
METHODS: In this paper, we comparatively analyze the density-based spatial clustering of applications with noise algorithm (DBSCAN), a k-means based algorithm, and an algorithm based on quadratic variation as methods of differentiating periods of swallowing activity from periods of time without swallows. These algorithms utilized swallowing vibration data exclusively and compared the results to a gold standard measure of swallowing duration. Data was collected from 23 subjects that were actively suffering from swallowing difficulties.
RESULTS: Comparing the performance of the DBSCAN algorithm with a proven segmentation algorithm that utilizes k-means clustering demonstrated that the DBSCAN algorithm had a higher sensitivity and correctly segmented more swallows. Comparing its performance with a threshold-based algorithm that utilized the quadratic variation of the signal showed that the DBSCAN algorithm offered no direct increase in performance. However, it offered several other benefits including a faster run time and more consistent performance between patients. All algorithms showed noticeable differentiation from the endpoints provided by a videofluoroscopy examination as well as reduced sensitivity.
CONCLUSIONS: In summary, we showed that the DBSCAN algorithm is a viable method for detecting the occurrence of a swallowing event using cervical auscultation signals, but significant work must be done to improve its performance before it can be implemented in an unsupervised manner.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Cervical auscultation; Dysphagia; Novelty detection; Segmentation; Swallowing accelerometry

Mesh:

Year:  2015        PMID: 25658505      PMCID: PMC4363248          DOI: 10.1016/j.compbiomed.2015.01.007

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


  39 in total

1.  Clinical utility of the modified barium swallow.

Authors:  B Martin-Harris; J A Logemann; S McMahon; M Schleicher; J Sandidge
Journal:  Dysphagia       Date:  2000       Impact factor: 3.438

2.  Swallowing detection by sonic and subsonic frequencies: a comparison.

Authors:  Juan M Fontana; Pedro L Melo; Edward S Sazonov
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2011

3.  Vocalization removal for improved automatic segmentation of dual-axis swallowing accelerometry signals.

Authors:  Ervin Sejdić; Tiago H Falk; Catriona M Steele; Tom Chau
Journal:  Med Eng Phys       Date:  2010-05-18       Impact factor: 2.242

4.  Baseline characteristics of dual-axis cervical accelerometry signals.

Authors:  Ervin Sejdić; Vicki Komisar; Catriona M Steele; Tom Chau
Journal:  Ann Biomed Eng       Date:  2010-03       Impact factor: 3.934

5.  Radiation dose in videofluoroscopic swallow studies.

Authors:  Ivan Zammit-Maempel; Claire-Louise Chapple; Paula Leslie
Journal:  Dysphagia       Date:  2006-10-06       Impact factor: 3.438

6.  Changes in pharyngeal dimensions effected by chin tuck.

Authors:  M V Welch; J A Logemann; A W Rademaker; P J Kahrilas
Journal:  Arch Phys Med Rehabil       Date:  1993-02       Impact factor: 3.966

7.  Radiation exposure time during MBSS: influence of swallowing impairment severity, medical diagnosis, clinician experience, and standardized protocol use.

Authors:  Heather Shaw Bonilha; Kate Humphries; Julie Blair; Elizabeth G Hill; Katlyn McGrattan; Brittni Carnes; Walter Huda; Bonnie Martin-Harris
Journal:  Dysphagia       Date:  2012-06-13       Impact factor: 3.438

8.  Chin-down posture effect on aspiration in dysphagic patients.

Authors:  T K Shanahan; J A Logemann; A W Rademaker; B R Pauloski; P J Kahrilas
Journal:  Arch Phys Med Rehabil       Date:  1993-07       Impact factor: 3.966

Review 9.  Strength-training exercise in dysphagia rehabilitation: principles, procedures, and directions for future research.

Authors:  Lori M Burkhead; Christine M Sapienza; John C Rosenbek
Journal:  Dysphagia       Date:  2007-04-25       Impact factor: 3.438

Review 10.  Role of videofluoroscopy in evaluation of neurologic dysphagia.

Authors:  M G Rugiu
Journal:  Acta Otorhinolaryngol Ital       Date:  2007-12       Impact factor: 2.124

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  15 in total

1.  A Matched Dual-Tree Wavelet Denoising for Tri-Axial Swallowing Vibrations.

Authors:  Joshua M Dudik; James L Coyle; Amro El-Jaroudi; Mingui Sun; Ervin Sejdić
Journal:  Biomed Signal Process Control       Date:  2016-03-08       Impact factor: 3.880

2.  A comparison between swallowing sounds and vibrations in patients with dysphagia.

Authors:  Faezeh Movahedi; Atsuko Kurosu; James L Coyle; Subashan Perera; Ervin Sejdić
Journal:  Comput Methods Programs Biomed       Date:  2017-03-10       Impact factor: 5.428

Review 3.  Oropharyngeal dysphagia: manifestations and diagnosis.

Authors:  Nathalie Rommel; Shaheen Hamdy
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2015-12-02       Impact factor: 46.802

4.  Detection of Swallow Kinematic Events From Acoustic High-Resolution Cervical Auscultation Signals in Patients With Stroke.

Authors:  Atsuko Kurosu; James L Coyle; Joshua M Dudik; Ervin Sejdic
Journal:  Arch Phys Med Rehabil       Date:  2018-07-30       Impact factor: 3.966

5.  Anatomical Directional Dissimilarities in Tri-axial Swallowing Accelerometry Signals.

Authors:  Faezeh Movahedi; Atsuko Kurosu; James L Coyle; Subashan Perera; Ervin Sejdic
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2016-06-07       Impact factor: 3.802

6.  High-Resolution Cervical Auscultation and Data Science: New Tools to Address an Old Problem.

Authors:  James L Coyle; Ervin Sejdić
Journal:  Am J Speech Lang Pathol       Date:  2020-07-10       Impact factor: 2.408

7.  Tracking Hyoid Bone Displacement During Swallowing Without Videofluoroscopy Using Machine Learning of Vibratory Signals.

Authors:  Cara Donohue; Shitong Mao; Ervin Sejdić; James L Coyle
Journal:  Dysphagia       Date:  2020-05-17       Impact factor: 3.438

8.  Establishing Reference Values for Temporal Kinematic Swallow Events Across the Lifespan in Healthy Community Dwelling Adults Using High-Resolution Cervical Auscultation.

Authors:  Cara Donohue; Yassin Khalifa; Shitong Mao; Subashan Perera; Ervin Sejdić; James L Coyle
Journal:  Dysphagia       Date:  2021-05-20       Impact factor: 3.438

9.  Characterizing Swallows From People With Neurodegenerative Diseases Using High-Resolution Cervical Auscultation Signals and Temporal and Spatial Swallow Kinematic Measurements.

Authors:  Cara Donohue; Yassin Khalifa; Shitong Mao; Subashan Perera; Ervin Sejdić; James L Coyle
Journal:  J Speech Lang Hear Res       Date:  2021-08-24       Impact factor: 2.297

10.  How Closely do Machine Ratings of Duration of UES Opening During Videofluoroscopy Approximate Clinician Ratings Using Temporal Kinematic Analyses and the MBSImP?

Authors:  Cara Donohue; Yassin Khalifa; Subashan Perera; Ervin Sejdić; James L Coyle
Journal:  Dysphagia       Date:  2020-09-21       Impact factor: 2.733

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