| Literature DB >> 25649949 |
Shintaro Tomura1, Mona Uchida, Tomohiro Yonezawa, Masato Kobayashi, Makoto Bonkobara, Satoko Arai, Toru Miyazaki, Satoshi Tamahara, Naoaki Matsuki.
Abstract
Apoptosis inhibitor of macrophage (AIM) plays roles in survival of macrophages. In this study, we cloned canine AIM cDNA and observed its transcriptional expression levels in various tissues. The coding sequence of canine AIM was 1,023 bp encoding 340 amino acid residues, which had around 65% homology with those of the human, mouse and rat. Transcriptional expression of AIM was observed in the spleen, lung, liver and lymph node, which confirmed the expression of canine AIM in tissue macrophages. Moreover, AIM was highly expressed in one of the canine histiocytic sarcoma cell lines. CD36, the receptor of AIM, was also expressed in various tissues and these cell lines. These findings are useful to reveal the actual functions of canine AIM.Entities:
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Year: 2014 PMID: 25649949 PMCID: PMC4300382 DOI: 10.1292/jvms.14-0166
Source DB: PubMed Journal: J Vet Med Sci ISSN: 0916-7250 Impact factor: 1.267
Sequences of oligonucleotide primers used for gene cloning of canine AIM
| Primers | Sequence (5′–3′) | Positions | |
|---|---|---|---|
| P1 | Forward | GTC AGC ATC TCC AGC AGC CTG | –25–5 |
| P2 | Forward | GAA CTT TGC AGC TGC CAA GGT G | 477–498 |
| P3 | Reverse | CAT TTC CGG GTC AGT ATG GCC | 545–525 |
| P4 | Reverse | GGT CAG CTC AGG CAT CAG GTA G | 1051–1030 |
Fig. 1.Nucleotide and deduced amino acid sequences of canine AIM (accession number: AB_915633). The CDS of canine AIM was composed of 1,023 bp encoding 340 amino acids residues. The predicted signal peptide of canine AIM is marked by an underline. The three presumed SRCR domains are boxed with solid lines. Predicted N-linked glycosylation sites were shown as circles.
Fig. 2.Alignment of the deduced amino acid sequence of the CDS of canine AIM with those of human, mouse and rat homologs. The deduced amino acid sequence of canine AIM cDNA cloned in this study was shown to have 66.2%, 61.0% and 64.5% similarity with those of the human, mouse and rat counterparts, respectively. Asterisks indicate identical amino acids. Colons and periods indicate strong and weak conservation of similar amino acid properties. The predicted signal peptide of canine AIM is marked by an underline. Cysteine residues are shown on a black background. The three presumed SRCR domains are boxed with solid lines.
Fig. 3.Expression levels of AIM and CD36 mRNA in five healthy adult dog tissues. These gene expression levels were normalized to GAPDH. The columns and error bars represent the means and their standard errors.
Sequences of oligonucleotide primers used for q-PCR
| Primer set | Sequence (5′–3′) | Positions | Accession number |
|---|---|---|---|
| AIM | |||
| Forward | TCC AGA GAA TGT GCG ACT GG | 378–488 | XM_005622660 |
| Reverse | GCT GCA AAG TTC CAG CTT CC | ||
| CD36 | |||
| Forward | AAG GAA GTT GTA CTT GAA GAA GGT | 118–224 | GU_108578 |
| Reverse | TCC TGT GCA TTT TGC ACG TC | ||
| GAPDH | |||
| Forward | GCT GCC AAA TAT GAC GAC ATC A | 748–822 | NM_001003142 |
| Reverse | GTA GCC CAG GAT GCC TTT GAG | ||
Fig. 4.Expression levels of AIM and CD36 mRNA in eight histiocytic sarcoma cell lines. These gene expression levels were normalized to GAPDH. The columns and error bars represent the means and their standard errors.