| Literature DB >> 25648510 |
Nadezhda E Ustyuzhanina1, Polina A Fomitskaya2, Alexey G Gerbst3, Andrey S Dmitrenok4, Nikolay E Nifantiev5.
Abstract
Natural anionic polysaccharides fucosylatedEntities:
Mesh:
Substances:
Year: 2015 PMID: 25648510 PMCID: PMC4344601 DOI: 10.3390/md13020770
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 5.118
Figure 1Branched fragments of fucosylated chondroitin sulfates from sea cucumbers.
Figure 2The target compounds 1–8 related to branching sites of fucosylated chondroitin sulfates (FCS).
Figure 3Monosaccharide building blocks applied for the synthesis of FCS related oligosaccharides.
Figure 4Expected non-stabilized (I) and stabilized (II), (III) fucosyl cations in glycosylation reactions of fucosyl donor 12. 3D structures of cations were obtained by SCF/MP2 method.
Stabilization energy of the fucosyl cations.
| Donor | The Stabilizing Group | Stabilization Energy Calculated at MM+ Level, Kcal/Mole | Stabilization Energy Calculated at SCF/MP2 Level, Kcal/Mole |
|---|---|---|---|
| 3- | |||
| 4- | |||
| 3- | |||
| 4- |
Scheme 1Synthesis of the disaccharides 1–5. Reagents and conditions: (i) TMSOTf, CH2Cl2, −30 °C, 92%; (ii) (NH2)2CS, collidine, MeOH, 94%; (iii) Bu2SnO, BzCl (1.1 eq), 80%; (iv) (a) H2, Pd(OH)2/C; (b) LiOH, H2O, THF; (c) NaOH, H2O, 79%; (v) (a) AcCl, Py; (b) H2, Pd(OH)2/C; (c) SO3·Py, DMF; (d) Amberlite IR-120 (Na+), NaHCO3; (e) LiOH, H2O, THF; (f) NaOH, H2O, 64%; (vi) (a) SO3·Py, DMF; (b) Amberlite IR-120 (Na+), NaHCO3; (c) H2, Pd(OH)2/C; (d) LiOH, H2O, THF; (e) NaOH, H2O, 62%; (vii) (a) H2, Pd(OH)2/C; (b) SO3·Py, DMF; (c) Amberlite IR-120 (Na+); NaHCO3; (d) LiOH, H2O, THF; (e) NaOH, H2O, 52%.
Scheme 2Preparation of the difucoside donor 18. Reagents and conditions: (i) (a) TMSOTf, CH2Cl2, −30 °C; (b) (ClСH2CO)2O, Py, 78%; (ii) (a) PdCl2, MeOH; (b) CCl3CN, Cs2CO3, 84%.
Scheme 3Synthesis of the trisaccharides 6–8. Reagents and conditions: (i) TMSOTf, CH2Cl2, −30 °C, 90%; (ii) (NH2)2CS, collidine, MeOH, 92%; (iii) (a) H2, Pd(OH)2/C; (b) LiOH, H2O, THF; (c) NaOH, H2O, 82%; (iv) (a) AcCl, Py, (b) H2, Pd(OH)2/C; (c) SO3·Py, DMF; (d) Amberlite IR-120 (Na+), NaHCO3; (e) LiOH, H2O, THF; (f) NaOH, H2O, 54%; (v) (a) SO3·Py, DMF; (b) Amberlite IR-120 (Na+), NaHCO3; (c) H2, Pd(OH)2/C; (d) LiOH, H2O, THF; (e) NaOH, H2O, 62%.
13C data for the target compounds 1–8.
| Compound | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
|---|---|---|---|---|---|---|---|
| →3)-β- | 103.2 | 74.8 | 83.5 | 71.7 | 78.0 | 176.9 | |
| α- | 100.7 | 69.6 | 70.8 | 73.2 | 68.1 | 16.5 | |
| →3)-β- | 103.0 | 74.7 | 83.2 | 71.6 | 77.9 | 176.8 | |
| α- | 98.4 | 68.7 | 73.3 | 68.0 | 16.5 | ||
| →3)-β- | 103.5 | 74.6 | 83.5 | 71.6 | 78.1 | 176.8 | |
| α- | 100.5 | 67.8 | 67.8 | 17.0 | |||
| →3)-β- | 102.1 | 73.4 | 82.2 | 70.5 | 76.8 | 176.8 | |
| α- | 99.1 | 68.6 | 68.6 | 66.4 | 17.0 | ||
| →3)-β- | 103.0 | 74.7 | 83.2 | 71.5 | 77.9 | 176.8 | |
| α- | 98.3 | 67.8 | 67.4 | 16.9 | |||
| →3)-β- | 103.1 | 74.6 | 83.6 | 71.7 | 78.0 | 176.8 | |
| →3)-α- | 100.7 | 70.7 | 73.2 | 69.5 | 68.1 | 16.5 | |
| α- | 96.5 | 69.3 | 68.2 | 75.9 | 67.9 | 16.5 | |
| →3)-β- | 103.1 | 75.2 | 83.2 | 71.6 | 78.0 | 176.9 | |
| →3)-α- | 98.5 | 74.3 | 70.0 | 68.2 | 16.5 | ||
| α- | 95.5 | 68.6 | 73.4 | 67.6 | 16.5 | ||
| →3)-β- | 102.1 | 73.4 | 82.2 | 70.5 | 76.8 | 176.8 | |
| →3)-α- | 99.1 | 68.6 | 74.0 | 66.4 | 16.9 | ||
| α- | 100.5 | 67.8 | 67.8 | 17.0 |
1H NMR data for the target compounds 1–8.
| Compound | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
|---|---|---|---|---|---|---|---|
| →3)-β- | 4.48 | 3.51 | 3.60 | 3.63 | 3.74 | - | |
| α- | 5.27 | 3.79 | 3.92 | 3.82 | 4.37 | 1.20 | |
| →3)-β- | 4.49 | 3.55 | 3.65 | 3.65 | 3.74 | - | |
| α- | 5.57 | 4.05 | 3.90 | 4.44 | 1.21 | ||
| →3)-β- | 4.48 | 3.55 | 3.67 | 3.63 | 3.74 | - | |
| α- | 5.36 | 4.00 | 4.52 | 1.27 | |||
| →3)-β- | 4.47 | 3.50 | 3.62 | 3.62 | 3.73 | - | |
| α- | 5.30 | 3.83 | 4.02 | 4.50 | 1.23 | ||
| →3)-β- | 4.47 | 3.55 | 3.63 | 3.66 | 3.73 | - | |
| α- | 5.60 | 4.17 | 4.55 | 1.27 | |||
| →3)-β- | 4.49 | 3.55 | 3.63 | 3.65 | 3.74 | - | |
| →3)-α- | 5.31 | 3.98 | 3.84 | 4.04 | 4.31 | 1.21 | |
| α- | 5.09 | 3.82 | 3.95 | 3.95 | 4.37 | 1.21 | |
| →3)-β- | 4.49 | 3.63 | 3.65 | 3.67 | 3.74 | - | |
| →3)-α- | 5.60 | 4.07 | 4.10 | 4.42 | 1.24 | ||
| α- | 5.34 | 4.12 | 3.91 | 4.49 | 1.26 | ||
| →3)-β- | 4.46 | 3.55 | 3.63 | 3.65 | 3.73 | - | |
| →3)-α- | 5.32 | 4.00 | 4.08 | 4.46 | 1.24 | ||
| α- | 5.20 | 3.92 | 4.46 | 1.27 |