Literature DB >> 25641866

Sugarcane proteomics: An update on current status, challenges, and future prospects.

Leonard Barnabas1, Ashwin Ramadass1, Ramesh Sundar Amalraj1, Malathi Palaniyandi1, Viswanathan Rasappa1.   

Abstract

Sugarcane is one of the most important commercial crops cultivated worldwide for the production of crystal sugar, ethanol, and other related by-products. Unlike other comparable monocots like sorghum, maize, and rice, sugarcane genome by virtue of its polyploidy nature remains yet to be fully deciphered. Proteomics-an established complementary tool to genomics is at its infancy in sugarcane as compared to the other monocots. However, with the surge in genomics research accomplished by next-generation sequencing platforms, sugarcane proteomics has gained momentum. This review summarizes the available literature from 1970 to 2014, which ensures a comprehensive coverage on sugarcane proteomics-a topic first of its kind to be reviewed. We herewith compiled substantial contributions in different areas of sugarcane proteomics, which include abiotic and biotic stresses, cell wall, organelle, and structural proteomics. The past decade has witnessed a paradigm shift in the pace with which sugarcane proteomics is progressing, as evident by the number of research publications. In addition to extensively reviewing the progress made thus far, we intend to highlight the scope in sugarcane proteomics, with an aspiration to instigate focused research on sugarcane to harness its full potential for the human welfare.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Abiotic and biotic stress; Mass spectrometry; Plant proteomics; Sugarcane; Two-dimensional gel electrophoresis

Mesh:

Substances:

Year:  2015        PMID: 25641866     DOI: 10.1002/pmic.201400463

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  10 in total

1.  Identification and Expression Profiling of WRKY Family Genes in Sugarcane in Response to Bacterial Pathogen Infection and Nitrogen Implantation Dosage.

Authors:  Talha Javed; Jing-Ru Zhou; Juan Li; Zhong-Ting Hu; Qin-Nan Wang; San-Ji Gao
Journal:  Front Plant Sci       Date:  2022-06-09       Impact factor: 6.627

2.  Comparative proteomics reveals that central metabolism changes are associated with resistance against Sporisorium scitamineum in sugarcane.

Authors:  Yachun Su; Liping Xu; Zhuqing Wang; Qiong Peng; Yuting Yang; Yun Chen; Youxiong Que
Journal:  BMC Genomics       Date:  2016-10-12       Impact factor: 3.969

3.  Hormetic Response by Silver Nanoparticles on In Vitro Multiplication of Sugarcane (Saccharum spp. Cv. Mex 69-290) Using a Temporary Immersion System.

Authors:  Jericó J Bello-Bello; Rocío A Chavez-Santoscoy; Carlos A Lecona-Guzmán; Nina Bogdanchikova; Josafhat Salinas-Ruíz; Fernando Carlos Gómez-Merino; Alexey Pestryakov
Journal:  Dose Response       Date:  2017-12-04       Impact factor: 2.658

4.  Proteomic Analysis of the Resistance Mechanisms in Sugarcane during Sporisorium scitamineum Infection.

Authors:  Pratiksha Singh; Qi-Qi Song; Rajesh Kumar Singh; Hai-Bi Li; Manoj Kumar Solanki; Mukesh Kumar Malviya; Krishan Kumar Verma; Li-Tao Yang; Yang-Rui Li
Journal:  Int J Mol Sci       Date:  2019-01-29       Impact factor: 5.923

5.  Comparative Transcriptome Profiling of Resistant and Susceptible Sugarcane Cultivars in Response to Infection by Xanthomonas albilineans.

Authors:  Mbuya Sylvain Ntambo; Jian-Yu Meng; Philippe C Rott; Robert J Henry; Hui-Li Zhang; San-Ji Gao
Journal:  Int J Mol Sci       Date:  2019-12-05       Impact factor: 5.923

6.  Discovery of potential protein biomarkers associated with sugarcane white leaf disease susceptibility using a comparative proteomic approach.

Authors:  Kantinan Leetanasaksakul; Sittiruk Roytrakul; Narumon Phaonakrop; Suthathip Kittisenachai; Siriwan Thaisakun; Nitiya Srithuanok; Klanarong Sriroth; Laurent Soulard
Journal:  PeerJ       Date:  2022-01-05       Impact factor: 2.984

Review 7.  Impact of Agroclimatic Variables on Proteogenomics in Sugar Cane (Saccharum spp.) Plant Productivity.

Authors:  Krishan K Verma; Xiu-Peng Song; Garima Yadav; Hewan Demissie Degu; Aqsa Parvaiz; Munna Singh; Hai-Rong Huang; Ghulam Mustafa; Lin Xu; Yang-Rui Li
Journal:  ACS Omega       Date:  2022-06-29

Review 8.  Sugarcane Omics: An Update on the Current Status of Research and Crop Improvement.

Authors:  Ahmad Ali; Mehran Khan; Rahat Sharif; Muhammad Mujtaba; San-Ji Gao
Journal:  Plants (Basel)       Date:  2019-09-12

9.  Identification of Differentially Expressed Proteins in Sugarcane in Response to Infection by Xanthomonas albilineans Using iTRAQ Quantitative Proteomics.

Authors:  Jian-Yu Meng; Mbuya Sylvain Ntambo; Philippe C Rott; Hua-Ying Fu; Mei-Ting Huang; Hui-Li Zhang; San-Ji Gao
Journal:  Microorganisms       Date:  2020-01-03

10.  Global Gene Responses of Resistant and Susceptible Sugarcane Cultivars to Acidovorax avenae subsp. avenae Identified Using Comparative Transcriptome Analysis.

Authors:  Na Chu; Jing-Ru Zhou; Hua-Ying Fu; Mei-Ting Huang; Hui-Li Zhang; San-Ji Gao
Journal:  Microorganisms       Date:  2019-12-19
  10 in total

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