Literature DB >> 25637665

High-resolution HLA-A, HLA-B, and HLA-DRB1 haplotype frequencies from the French Bone Marrow Donor Registry.

Pierre-Antoine Gourraud1, Derek James Pappas2, Amar Baouz3, Marie-Lorraine Balère3, Federico Garnier3, Evelyne Marry3.   

Abstract

We have estimated human leukocyte antigen (HLA) haplotype frequencies using the maximum likelihood mode, which accommodates typing ambiguities. The results of the frequency distribution of the 7015 haplotypes obtained are presented here. These include a total of 114 HLA-A, 185 HLA-B, and 76 HLA-DRB1 unique alleles at each locus. Across all populations, although the most common individual HLA alleles were HLA-A(∗)02:01 (29.0%), HLA-B(∗)07:02 (11.4%), and HLA-DRB1(∗)07:01 (15.9%), the most frequent haplotype was found to be HLA-A(∗)01:01∼B(∗)08:01∼DRB1(∗)03:01.
Copyright © 2015 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Bone marrow donor registry; Genetic epidemiology; Haplotype; Hematopoietic stem cell donor; Peripheral blood stem cell donor cord blood bank

Mesh：

Substances：

Year:  2015        PMID： 25637665     DOI： 10.1016/j.humimm.2015.01.028

Source DB:  PubMed          Journal:  Hum Immunol        ISSN： 0198-8859            Impact factor:   2.850


  7 in total

1.  Next-generation sequencing reveals new information about HLA allele and haplotype diversity in a large European American population.

Authors:  Lisa E Creary; Sridevi Gangavarapu; Kalyan C Mallempati; Gonzalo Montero-Martín; Stacy J Caillier; Adam Santaniello; Jill A Hollenbach; Jorge R Oksenberg; Marcelo A Fernández-Viña
Journal:  Hum Immunol       Date:  2019-07-22       Impact factor: 2.850

2.  Performance of an allele-level multi-locus HLA genotype imputation tool in hematopoietic stem cell donors from Quebec.

Authors:  Abdelhakim Ferradji; Yasmin D'Souza; Chee Loong Saw; Karim Oualkacha; Lucie Richard; Ruth Sapir-Pichhadze
Journal:  Immun Inflamm Dis       Date:  2017-08-25

3.  Human Leukocyte Antigen-A, B, C, DRB1, and DQB1 Allele and Haplotype Frequencies in a Subset of 237 Donors in the South African Bone Marrow Registry.

Authors:  Mqondisi Tshabalala; Charlotte Ingram; Terry Schlaphoff; Veronica Borrill; Alan Christoffels; Michael S Pepper
Journal:  J Immunol Res       Date:  2018-04-23       Impact factor: 4.818

4.  Probability of success in the search for a related bone marrow donor in Cologne, Germany using HLA-A, -B and -DRB1 haplotype frequencies.

Authors:  Daniel M Hellmann; Stela Radojska; Rolf Fimmers; Birgit S Gathof
Journal:  HLA       Date:  2018-09       Impact factor: 4.513

Review 5.  Immunogenetics in stem cell donor registry work: The DKMS example (Part 2).

Authors:  Alexander H Schmidt; Jürgen Sauter; Daniel M Baier; Jessica Daiss; Andreas Keller; Anja Klussmeier; Thilo Mengling; Gabi Rall; Tobias Riethmüller; Gerhard Schöfl; Ute V Solloch; Tigran Torosian; David Means; Helen Kelly; Latha Jagannathan; Patrick Paul; Anette S Giani; Sabine Hildebrand; Stephan Schumacher; Jan Markert; Monika Füssel; Jan A Hofmann; Thomas Schäfer; Julia Pingel; Vinzenz Lange; Johannes Schetelig
Journal:  Int J Immunogenet       Date:  2020-02-07       Impact factor: 1.466

6.  High Resolution HLA ∼A, ∼B, ∼C, ∼DRB1, ∼DQA1, and ∼DQB1 Diversity in South African Populations.

Authors:  Mqondisi Tshabalala; Juanita Mellet; Kuben Vather; Derrick Nelson; Fathima Mohamed; Alan Christoffels; Michael S Pepper
Journal:  Front Genet       Date:  2022-03-04       Impact factor: 4.599

7.  Easy-HLA: a validated web application suite to reveal the full details of HLA typing.

Authors:  Estelle Geffard; Sophie Limou; Alexandre Walencik; Michelle Daya; Harold Watson; Dara Torgerson; Kathleen C Barnes; Anne Cesbron Gautier; Pierre-Antoine Gourraud; Nicolas Vince
Journal:  Bioinformatics       Date:  2020-04-01       Impact factor: 6.937
  7 in total

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