Literature DB >> 25635368

Anomalous transport of subdiffusing cargos by single kinesin motors: the role of mechano-chemical coupling and anharmonicity of tether.

Igor Goychuk1.   

Abstract

Here we generalize our previous model of molecular motors trafficking subdiffusing cargos in viscoelastic cytosol by (i) including mechano-chemical coupling between cyclic conformational fluctuations of the motor protein driven by the reaction of ATP hydrolysis and its translational motion within the simplest two-state model of hand-over-hand motion of kinesin, and also (ii) by taking into account the anharmonicity of the tether between the motor and the cargo (its maximally possible extension length). It is shown that the major earlier results such as occurrence of normal versus anomalous transport depending on the amplitude of binding potential, cargo size and the motor turnover frequency not only survive in this more realistic model, but the results also look very similar for the correspondingly adjusted parameters. However, this more realistic model displays a substantially larger thermodynamic efficiency due to a bidirectional mechano-chemical coupling. For realistic parameters, the maximal thermodynamic efficiency can transiently be about 50% as observed for kinesins, and even larger, surprisingly also in a novel strongly anomalous (sub)transport regime, where the motor enzymatic turnovers become also anomalously slow and cannot be characterized by a turnover rate. Here anomalously slow dynamics of the cargo enforces anomalously slow cyclic kinetics of the motor protein.

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Year:  2015        PMID: 25635368     DOI: 10.1088/1478-3975/12/1/016013

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  3 in total

Review 1.  Molecular machines operating on the nanoscale: from classical to quantum.

Authors:  Igor Goychuk
Journal:  Beilstein J Nanotechnol       Date:  2016-03-03       Impact factor: 3.649

2.  Sensing Magnetic Fields with Magnetosensitive Ion Channels.

Authors:  Igor Goychuk
Journal:  Sensors (Basel)       Date:  2018-02-28       Impact factor: 3.576

3.  Investigation of multiple-dynein transport of melanosomes by non-invasive force measurement using fluctuation unit χ.

Authors:  Shin Hasegawa; Takashi Sagawa; Kazuho Ikeda; Yasushi Okada; Kumiko Hayashi
Journal:  Sci Rep       Date:  2019-03-25       Impact factor: 4.379

  3 in total

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