Literature DB >> 25634681

Quantum chemistry study of proton transport in imidazole chains.

Milan Kumar1, Arun Venkatnathan.   

Abstract

Hydrogen bonding in imidazole plays a key role in proton conduction and rotation of an imidazole molecule in the process results in the cleavage of hydrogen bonds between molecules. In the present work, we characterize proton transport and rotation energy barriers in imidazole chains by density functional theory. Our calculations show that propagation of an excess proton along the chain requires crossing of energy barriers, lower than 1 kcal/mol. The presence of the proton has stronger effect on the immediate neighboring imidazole molecules, and the effect is negligible after two molecules. The subsequent rotation of all imidazole molecules after the transfer of first proton is essential to allow the transfer the second proton. The presence of an excess proton in the chain leads to cleavage of hydrogen bonds and the rotation of neighboring imidazole molecule. Further, rotation of one imidazole molecule results in rotation of all molecules in the chain. The calculated rotational energy barriers in two-, three-, and four-imidazole-molecule chains are 8.0, 17.1, and 20.0 kcal, respectively, and are equivalent to the number of hydrogen bonds broken in the process. The rotational barrier is higher than the proton transport barrier along the hydrogen bond and, thus, is the rate-determining step of proton conduction.

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Year:  2015        PMID: 25634681     DOI: 10.1021/jp508994c

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  2 in total

1.  Limiting Values of the one-bond C-H Spin-Spin Coupling Constants of the Imidazole Ring of Histidine at High-pH.

Authors:  Jorge A Vila; Harold A Scheraga
Journal:  J Mol Struct       Date:  2017-01-08       Impact factor: 3.196

2.  Proton Conduction at High Temperature in High-Symmetry Hydrogen-Bonded Molecular Crystals of RuIII Complexes with Six Imidazole-Imidazolate Ligands.

Authors:  Makoto Tadokoro; Masaki Itoh; Ryota Nishimura; Kensuke Sekiguchi; Norihisa Hoshino; Hajime Kamebuchi; Jun Miyazaki; Fumiya Kobayashi; Motohiro Mizuno; Tomoyuki Akutagawa
Journal:  Chemistry       Date:  2022-07-26       Impact factor: 5.020

  2 in total

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