Literature DB >> 25634548

¹³C-based metabolic flux analysis of Saccharomyces cerevisiae with a reduced Crabtree effect.

Shuichi Kajihata1, Fumio Matsuda2, Mika Yoshimi3, Kenshi Hayakawa4, Chikara Furusawa5, Akihisa Kanda6, Hiroshi Shimizu7.   

Abstract

Saccharomyces cerevisiae shows a Crabtree effect that produces ethanol in a high glucose concentration even under fully aerobic condition. For efficient production of cake yeast or compressed yeast for baking, ethanol by-production is not desired since glucose limited chemostat or fed-batch cultivations are performed to suppress the Crabtree effect. In this study, the (13)C-based metabolic flux analysis ((13)C-MFA) was performed for the S288C derived S. cerevisiae strain to characterize a metabolic state under the reduced Crabtree effect. S. cerevisiae cells were cultured at a low dilution rate (0.1 h(-1)) under the glucose-limited chemostat condition. The estimated metabolic flux distribution showed that the acetyl-CoA in mitochondria was mainly produced from pyruvate by pyruvate dehydrogenase (PDH) reaction and that the level of the metabolic flux through the pentose phosphate pathway was much higher than that of the Embden-Meyerhof-Parnas pathway, which contributes to high biomass yield at low dilution rate by supplying NADPH required for cell growth.
Copyright © 2015 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  (13)C-based metabolic flux analysis; Central carbon metabolism; Crabtree effect; Redox balance; Saccharomyces cerevisiae

Mesh:

Substances:

Year:  2015        PMID: 25634548     DOI: 10.1016/j.jbiosc.2014.12.014

Source DB:  PubMed          Journal:  J Biosci Bioeng        ISSN: 1347-4421            Impact factor:   2.894


  6 in total

Review 1.  Achieving Metabolic Flux Analysis for S. cerevisiae at a Genome-Scale: Challenges, Requirements, and Considerations.

Authors:  Saratram Gopalakrishnan; Costas D Maranas
Journal:  Metabolites       Date:  2015-09-18

2.  A Method to Constrain Genome-Scale Models with 13C Labeling Data.

Authors:  Héctor García Martín; Vinay Satish Kumar; Daniel Weaver; Amit Ghosh; Victor Chubukov; Aindrila Mukhopadhyay; Adam Arkin; Jay D Keasling
Journal:  PLoS Comput Biol       Date:  2015-09-17       Impact factor: 4.475

3.  13C Metabolic Flux Analysis for Systematic Metabolic Engineering of S. cerevisiae for Overproduction of Fatty Acids.

Authors:  Amit Ghosh; David Ando; Jennifer Gin; Weerawat Runguphan; Charles Denby; George Wang; Edward E K Baidoo; Chris Shymansky; Jay D Keasling; Héctor García Martín
Journal:  Front Bioeng Biotechnol       Date:  2016-10-05

4.  Constraining Genome-Scale Models to Represent the Bow Tie Structure of Metabolism for 13C Metabolic Flux Analysis.

Authors:  Tyler W H Backman; David Ando; Jahnavi Singh; Jay D Keasling; Héctor García Martín
Journal:  Metabolites       Date:  2018-01-04

5.  A pyruvate carbon flux tugging strategy for increasing 2,3-butanediol production and reducing ethanol subgeneration in the yeast Saccharomyces cerevisiae.

Authors:  Jun Ishii; Keisuke Morita; Kengo Ida; Hiroko Kato; Shohei Kinoshita; Shoko Hataya; Hiroshi Shimizu; Akihiko Kondo; Fumio Matsuda
Journal:  Biotechnol Biofuels       Date:  2018-06-26       Impact factor: 6.040

6.  Repression of mitochondrial metabolism for cytosolic pyruvate-derived chemical production in Saccharomyces cerevisiae.

Authors:  Keisuke Morita; Fumio Matsuda; Koji Okamoto; Jun Ishii; Akihiko Kondo; Hiroshi Shimizu
Journal:  Microb Cell Fact       Date:  2019-10-15       Impact factor: 5.328

  6 in total

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