Literature DB >> 25633957

Novel mutations confirm that COL11A2 is responsible for autosomal recessive non-syndromic hearing loss DFNB53.

Imen Chakchouk1, M'hamed Grati, Guney Bademci, Mariem Bensaid, Qi Ma, Amine Chakroun, Joseph Foster, Denise Yan, Duygu Duman, Oscar Diaz-Horta, Abdelmonem Ghorbel, Rahul Mittal, Amjad Farooq, Mustafa Tekin, Saber Masmoudi, Xue Zhong Liu.   

Abstract

Hearing loss (HL) is a major public health issue. It is clinically and genetically heterogeneous.The identification of the causal mutation is important for early diagnosis, clinical follow-up, and genetic counseling. HL due to mutations in COL11A2, encoding collagen type XI alpha-2, can be non-syndromic autosomal-dominant or autosomal-recessive, and also syndromic as in Otospondylomegaepiphyseal Dysplasia, Stickler syndrome type III, and Weissenbacher-Zweymuller syndrome. However, thus far only one mutation co-segregating with autosomal recessive non-syndromic hearing loss (ARNSHL) in a single family has been reported. In this study, whole exome sequencing of two consanguineous families with ARNSHL from Tunisia and Turkey revealed two novel causative COL11A2 mutations, c.109G > T (p.Ala37Ser) and c.2662C > A (p.Pro888Thr). The variants identified co-segregated with deafness in both families. All homozygous individuals in those families had early onset profound hearing loss across all frequencies without syndromic findings. The variants are predicted to be damaging the protein function. The p.Pro888Thr mutation affects a -Gly-X-Y- triplet repeat motif. The novel p.Ala37Ser is the first missense mutation located in the NC4 domain of the COL11A2 protein. Structural model suggests that this mutation will likely obliterate, or at least partially compromise, the ability of NC4 domain to interact with its cognate ligands. In conclusion, we confirm that COL11A2 mutations cause ARNSHL and broaden the mutation spectrum that may shed new light on genotype-phenotype correlation for the associated phenotypes and clinical follow-up.

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Year:  2015        PMID: 25633957      PMCID: PMC4707654          DOI: 10.1007/s00438-015-0995-9

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  18 in total

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Review 2.  Comparative protein structure modeling of genes and genomes.

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Review 9.  Next-generation sequencing in genetic hearing loss.

Authors:  Denise Yan; Mustafa Tekin; Susan H Blanton; Xue Zhong Liu
Journal:  Genet Test Mol Biomarkers       Date:  2013-06-05

10.  Whole-exome sequencing efficiently detects rare mutations in autosomal recessive nonsyndromic hearing loss.

Authors:  Oscar Diaz-Horta; Duygu Duman; Joseph Foster; Aslı Sırmacı; Michael Gonzalez; Nejat Mahdieh; Nikou Fotouhi; Mortaza Bonyadi; Filiz Başak Cengiz; Ibis Menendez; Rick H Ulloa; Yvonne J K Edwards; Stephan Züchner; Susan Blanton; Mustafa Tekin
Journal:  PLoS One       Date:  2012-11-30       Impact factor: 3.240

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  13 in total

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Journal:  J Cell Sci       Date:  2018-04-09       Impact factor: 5.285

2.  Expert specification of the ACMG/AMP variant interpretation guidelines for genetic hearing loss.

Authors:  Andrea M Oza; Marina T DiStefano; Sarah E Hemphill; Brandon J Cushman; Andrew R Grant; Rebecca K Siegert; Jun Shen; Alex Chapin; Nicole J Boczek; Lisa A Schimmenti; Jaclyn B Murry; Linda Hasadsri; Kiyomitsu Nara; Margaret Kenna; Kevin T Booth; Hela Azaiez; Andrew Griffith; Karen B Avraham; Hannie Kremer; Heidi L Rehm; Sami S Amr; Ahmad N Abou Tayoun
Journal:  Hum Mutat       Date:  2018-11       Impact factor: 4.878

Review 3.  Research progress in pathogenic genes of hereditary non-syndromic mid-frequency deafness.

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4.  Dual Diagnosis of Ellis-van Creveld Syndrome and Hearing Loss in a Consanguineous Family.

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Journal:  Anat Rec (Hoboken)       Date:  2019-12-28       Impact factor: 2.064

6.  ELMOD3, a novel causative gene, associated with human autosomal dominant nonsyndromic and progressive hearing loss.

Authors:  Wu Li; Jie Sun; Jie Ling; Jiada Li; Chufeng He; Yalan Liu; Hongsheng Chen; Meichao Men; Zhijie Niu; Yuyuan Deng; Meng Li; Taoxi Li; Jie Wen; Shushan Sang; Haibo Li; Zhengqing Wan; Elodie M Richard; Prem Chapagain; Denise Yan; Xue Zhong Liu; Lingyun Mei; Yong Feng
Journal:  Hum Genet       Date:  2018-04-30       Impact factor: 4.132

7.  Rheumatoid arthritis in a patient with compound heterozygous variants in the COL11A2 gene and progressive hearing loss: A case report.

Authors:  Yumi Tsuchida; Yasuo Nagafuchi; Tomoko Uehara; Hisato Suzuki; Mamiko Yamada; Masanori Kono; Hiroaki Hatano; Hirofumi Shoda; Keishi Fujio; Kenjiro Kosaki
Journal:  Medicine (Baltimore)       Date:  2022-02-18       Impact factor: 1.817

8.  Characterization of ATPase Activity of P2RX2 Cation Channel.

Authors:  Rahul Mittal; M'hamed Grati; Miloslav Sedlacek; Fenghua Yuan; Qing Chang; Denise Yan; Xi Lin; Bechara Kachar; Amjad Farooq; Prem Chapagain; Yanbin Zhang; Xue Z Liu
Journal:  Front Physiol       Date:  2016-05-24       Impact factor: 4.566

9.  Variations in Multiple Syndromic Deafness Genes Mimic Non-syndromic Hearing Loss.

Authors:  G Bademci; F B Cengiz; J Foster Ii; D Duman; L Sennaroglu; O Diaz-Horta; T Atik; T Kirazli; L Olgun; H Alper; I Menendez; I Loclar; G Sennaroglu; S Tokgoz-Yilmaz; S Guo; Y Olgun; N Mahdieh; M Bonyadi; N Bozan; A Ayral; F Ozkinay; M Yildirim-Baylan; S H Blanton; M Tekin
Journal:  Sci Rep       Date:  2016-08-26       Impact factor: 4.379

10.  Comprehensive analysis via exome sequencing uncovers genetic etiology in autosomal recessive nonsyndromic deafness in a large multiethnic cohort.

Authors:  Guney Bademci; Joseph Foster; Nejat Mahdieh; Mortaza Bonyadi; Duygu Duman; F Basak Cengiz; Ibis Menendez; Oscar Diaz-Horta; Atefeh Shirkavand; Sirous Zeinali; Asli Subasioglu; Suna Tokgoz-Yilmaz; Fabiola Huesca-Hernandez; Maria de la Luz Arenas-Sordo; Juan Dominguez-Aburto; Edgar Hernandez-Zamora; Paola Montenegro; Rosario Paredes; Germania Moreta; Rodrigo Vinueza; Franklin Villegas; Santiago Mendoza-Benitez; Shengru Guo; Nazim Bozan; Tulay Tos; Armagan Incesulu; Gonca Sennaroglu; Susan H Blanton; Hatice Ozturkmen-Akay; Muzeyyen Yildirim-Baylan; Mustafa Tekin
Journal:  Genet Med       Date:  2015-07-30       Impact factor: 8.822

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