Literature DB >> 25632075

High-speed dynamic-clamp interface.

Yang Yang1, Timothy Adowski2, Bina Ramamurthy2, Andreas Neef3, Matthew A Xu-Friedman4.   

Abstract

The dynamic-clamp technique is highly useful for mimicking synaptic or voltage-gated conductances. However, its use remains rare in part because there are few systems, and they can be expensive and difficult for less-experienced programmers to implement. Furthermore, some conductances (such as sodium channels) can be quite rapid or may have complex voltage sensitivity, so high speeds are necessary. To address these issues, we have developed a new interface that uses a common personal computer platform with National Instruments data acquisition and WaveMetrics IGOR to provide a simple user interface. This dynamic clamp implements leak and linear synaptic conductances as well as a voltage-dependent synaptic conductance and kinetic channel conductances based on Hodgkin-Huxley or Markov models. The speed of the system can be assayed using a testing mode, and currently speeds of >100 kHz (10 μs per cycle) are achievable with short latency and little jitter.
Copyright © 2015 the American Physiological Society.

Entities:  

Keywords:  Markov model; WaveMetrics IGOR

Mesh:

Year:  2015        PMID: 25632075      PMCID: PMC4416557          DOI: 10.1152/jn.00543.2014

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.714


  14 in total

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Authors:  Jason S Rothman; Paul B Manis
Journal:  J Neurophysiol       Date:  2003-06       Impact factor: 2.714

Review 2.  The dynamic clamp comes of age.

Authors:  Astrid A Prinz; L F Abbott; Eve Marder
Journal:  Trends Neurosci       Date:  2004-04       Impact factor: 13.837

3.  Real-time kinetic modeling of voltage-gated ion channels using dynamic clamp.

Authors:  Lorin S Milescu; Tadashi Yamanishi; Krzysztof Ptak; Murtaza Z Mogri; Jeffrey C Smith
Journal:  Biophys J       Date:  2008-03-28       Impact factor: 4.033

4.  Dynamic clamp in cardiac and neuronal systems using RTXI.

Authors:  Francis A Ortega; Robert J Butera; David J Christini; John A White; Alan D Dorval
Journal:  Methods Mol Biol       Date:  2014

5.  Synaptic responses and electrical properties of cells in brain slices of the mouse anteroventral cochlear nucleus.

Authors:  D Oertel
Journal:  J Neurosci       Date:  1983-10       Impact factor: 6.167

6.  Dynamic clamp: computer-generated conductances in real neurons.

Authors:  A A Sharp; M B O'Neil; L F Abbott; E Marder
Journal:  J Neurophysiol       Date:  1993-03       Impact factor: 2.714

7.  Impact of synaptic depression on spike timing at the endbulb of Held.

Authors:  Hua Yang; Matthew A Xu-Friedman
Journal:  J Neurophysiol       Date:  2009-07-08       Impact factor: 2.714

8.  Context-dependent effects of NMDA receptors on precise timing information at the endbulb of Held in the cochlear nucleus.

Authors:  Lioudmila Pliss; Hua Yang; Matthew A Xu-Friedman
Journal:  J Neurophysiol       Date:  2009-09-02       Impact factor: 2.714

9.  Dynamic clamp with StdpC software.

Authors:  Ildikó Kemenes; Vincenzo Marra; Michael Crossley; Dávid Samu; Kevin Staras; György Kemenes; Thomas Nowotny
Journal:  Nat Protoc       Date:  2011-03-03       Impact factor: 13.491

10.  Control of local intracellular calcium concentration with dynamic-clamp controlled 2-photon uncaging.

Authors:  Erwin Idoux; Jerome Mertz
Journal:  PLoS One       Date:  2011-12-28       Impact factor: 3.240

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  6 in total

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2.  Synaptic Mechanisms underlying Temporally Precise Information Processing in the VNLL, an auditory brainstem nucleus.

Authors:  Nikolaos Kladisios; Linda Fischer; Florian Jenzen; Michael Rebhan; Christian Leibold; Felix Felmy
Journal:  J Neurosci       Date:  2022-07-20       Impact factor: 6.709

3.  Trends and Challenges in Neuroengineering: Toward "Intelligent" Neuroprostheses through Brain-"Brain Inspired Systems" Communication.

Authors:  Stefano Vassanelli; Mufti Mahmud
Journal:  Front Neurosci       Date:  2016-09-23       Impact factor: 4.677

4.  A Dynamic Clamp on Every Rig.

Authors:  Niraj S Desai; Richard Gray; Daniel Johnston
Journal:  eNeuro       Date:  2017-10-23

5.  Power-Law Dynamics of Membrane Conductances Increase Spiking Diversity in a Hodgkin-Huxley Model.

Authors:  Wondimu Teka; David Stockton; Fidel Santamaria
Journal:  PLoS Comput Biol       Date:  2016-03-03       Impact factor: 4.475

6.  Synapse-specific expression of calcium-permeable AMPA receptors in neocortical layer 5.

Authors:  Txomin Lalanne; Julia Oyrer; Adamo Mancino; Erica Gregor; Andrew Chung; Louis Huynh; Sasha Burwell; Jérôme Maheux; Mark Farrant; P Jesper Sjöström
Journal:  J Physiol       Date:  2015-12-17       Impact factor: 5.182

  6 in total

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