Literature DB >> 25625871

Fast and asymptotic computation of the fixation probability for Moran processes on graphs.

F Alcalde Cuesta1, P González Sequeiros2, Á Lozano Rojo3.   

Abstract

Evolutionary dynamics has been classically studied for homogeneous populations, but now there is a growing interest in the non-homogeneous case. One of the most important models has been proposed in Lieberman et al. (2005), adapting to a weighted directed graph the process described in Moran (1958). The Markov chain associated with the graph can be modified by erasing all non-trivial loops in its state space, obtaining the so-called Embedded Markov chain (EMC). The fixation probability remains unchanged, but the expected time to absorption (fixation or extinction) is reduced. In this paper, we shall use this idea to compute asymptotically the average fixation probability for complete bipartite graphs K(n,m). To this end, we firstly review some recent results on evolutionary dynamics on graphs trying to clarify some points. We also revisit the 'Star Theorem' proved in Lieberman et al. (2005) for the star graphs K(1,m). Theoretically, EMC techniques allow fast computation of the fixation probability, but in practice this is not always true. Thus, in the last part of the paper, we compare this algorithm with the standard Monte Carlo method for some kind of complex networks.
Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

Keywords:  Evolutionary dynamics; Expected fixation time; Fixation probability; Markov chain; Monte Carlo methods; Star and bipartite graphs

Mesh:

Year:  2015        PMID: 25625871     DOI: 10.1016/j.biosystems.2015.01.007

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  5 in total

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Journal:  PLoS Comput Biol       Date:  2021-02-02       Impact factor: 4.475

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Journal:  PLoS Comput Biol       Date:  2020-01-17       Impact factor: 4.475

  5 in total

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