| Literature DB >> 25620891 |
Kean Ming Tan1, Palma London2, Karthik Mohan2, Su-In Lee3, Maryam Fazel2, Daniela Witten4.
Abstract
We consider the problem of learning a high-dimensional graphical model in which there are a few hub nodes that are densely-connected to many other nodes. Many authors have studied the use of an ℓ1 penalty in order to learn a sparse graph in the high-dimensional setting. However, the ℓ1 penalty implicitly assumes that each edge is equally likely and independent of all other edges. We propose a general framework to accommodate more realistic networks with hub nodes, using a convex formulation that involves a row-column overlap norm penalty. We apply this general framework to three widely-used probabilistic graphical models: the Gaussian graphical model, the covariance graph model, and the binary Ising model. An alternating direction method of multipliers algorithm is used to solve the corresponding convex optimization problems. On synthetic data, we demonstrate that our proposed framework outperforms competitors that do not explicitly model hub nodes. We illustrate our proposal on a webpage data set and a gene expression data set.Entities:
Keywords: Gaussian graphical model; alternating direction method of multipliers; binary network; covariance graph; hub; lasso
Year: 2014 PMID: 25620891 PMCID: PMC4302963
Source DB: PubMed Journal: J Mach Learn Res ISSN: 1532-4435 Impact factor: 3.654