Literature DB >> 25619935

Generating site-specifically modified proteins via a versatile and stable nucleophilic carbon ligation.

Romas Kudirka1, Robyn M Barfield1, Jesse McFarland1, Aaron E Albers1, Gregory W de Hart1, Penelope M Drake1, Patrick G Holder1, Stefanie Banas1, Lesley C Jones1, Albert W Garofalo1, David Rabuka2.   

Abstract

There is a need for facile chemistries that allow for chemo- and regioselectivity in bioconjugation reactions. To address this need, we are pioneering site-specific bioconjugation methods that use formylglycine as a bioorthogonal handle on a protein surface. Here we introduce aldehyde-specific bioconjugation chemistry, the trapped-Knoevenagel ligation. The speed and stability of the trapped-Knoevenagel ligation further advances the repertoire of aldehyde-based bioconjugations and expands the toolbox for site-specific protein modifications. The trapped-Knoevenagel ligation reaction can be run at near neutral pH in the absence of catalysts to produce conjugates that are stable under physiological conditions. Using this new ligation, we generated an antibody-drug conjugate that demonstrates excellent efficacy in vitro and in vivo.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 25619935     DOI: 10.1016/j.chembiol.2014.11.019

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  19 in total

1.  Chemoselective ratiometric imaging of protein S-sulfenylation.

Authors:  Christopher T M B Tom; John E Crellin; Hashim F Motiwala; Matthew B Stone; Dahvid Davda; William Walker; Yu-Hsuan Kuo; Jeannie L Hernandez; Kristin J Labby; Lyanne Gomez-Rodriguez; Paul M Jenkins; Sarah L Veatch; Brent R Martin
Journal:  Chem Commun (Camb)       Date:  2017-06-29       Impact factor: 6.222

2.  A Case Study to Identify the Drug Conjugation Site of a Site-Specific Antibody-Drug-Conjugate Using Middle-Down Mass Spectrometry.

Authors:  Oscar Hernandez-Alba; Stéphane Houel; Steve Hessmann; Stéphane Erb; David Rabuka; Romain Huguet; Jonathan Josephs; Alain Beck; Penelope M Drake; Sarah Cianférani
Journal:  J Am Soc Mass Spectrom       Date:  2019-08-19       Impact factor: 3.109

3.  Insights from native mass spectrometry approaches for top- and middle- level characterization of site-specific antibody-drug conjugates.

Authors:  Thomas Botzanowski; Stéphane Erb; Oscar Hernandez-Alba; Anthony Ehkirch; Olivier Colas; Elsa Wagner-Rousset; David Rabuka; Alain Beck; Penelope M Drake; Sarah Cianférani
Journal:  MAbs       Date:  2017-04-13       Impact factor: 5.857

4.  Site-Specific Bioconjugation and Multi-Bioorthogonal Labeling via Rapid Formation of a Boron-Nitrogen Heterocycle.

Authors:  Tak Ian Chio; Han Gu; Kamalika Mukherjee; L Nathan Tumey; Susan L Bane
Journal:  Bioconjug Chem       Date:  2019-05-03       Impact factor: 4.774

5.  Click Chemistry Conjugations.

Authors:  Tak Ian Chio; Susan L Bane
Journal:  Methods Mol Biol       Date:  2020

6.  Site-Specific Tandem Knoevenagel Condensation-Michael Addition To Generate Antibody-Drug Conjugates.

Authors:  Romas A Kudirka; Robyn M Barfield; Jesse M McFarland; Penelope M Drake; Adam Carlson; Stefanie Bañas; Wes Zmolek; Albert W Garofalo; David Rabuka
Journal:  ACS Med Chem Lett       Date:  2016-08-30       Impact factor: 4.345

7.  Immunotargeting of Nanocrystals by SpyCatcher Conjugation of Engineered Antibodies.

Authors:  Cassio C S Pedroso; Victor R Mann; Kathrin Zuberbühler; Markus-Frederik Bohn; Jessica Yu; Virginia Altoe; Charles S Craik; Bruce E Cohen
Journal:  ACS Nano       Date:  2021-10-25       Impact factor: 18.027

Review 8.  Recent progress in enzymatic protein labelling techniques and their applications.

Authors:  Yi Zhang; Keun-Young Park; Kiall F Suazo; Mark D Distefano
Journal:  Chem Soc Rev       Date:  2018-09-27       Impact factor: 54.564

Review 9.  A Not-So-Ancient Grease History: Click Chemistry and Protein Lipid Modifications.

Authors:  Kiall F Suazo; Keun-Young Park; Mark D Distefano
Journal:  Chem Rev       Date:  2021-04-06       Impact factor: 72.087

10.  Reconstitution of Formylglycine-generating Enzyme with Copper(II) for Aldehyde Tag Conversion.

Authors:  Patrick G Holder; Lesley C Jones; Penelope M Drake; Robyn M Barfield; Stefanie Bañas; Gregory W de Hart; Jeanne Baker; David Rabuka
Journal:  J Biol Chem       Date:  2015-04-30       Impact factor: 5.157

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