Literature DB >> 25614591

New enveloped dsRNA phage from freshwater habitat.

Sari Mäntynen1, Elina Laanto1, Annika Kohvakka1, Minna M Poranen2, Jaana K H Bamford1, Janne J Ravantti3,2,1.   

Abstract

Cystoviridae is a family of bacteriophages with a tri-segmented dsRNA genome enclosed in a tri-layered virion structure. Here, we present a new putative member of the Cystoviridae family, bacteriophage ϕNN. ϕNN was isolated from a Finnish lake in contrast to the previously identified cystoviruses, which originate from various legume samples collected in the USA. The nucleotide sequence of the virus reveals a strong genetic similarity (~80 % for the L-segments, ~55 % for the M-segments and ~84 % for the S-segments) to Pseudomonas phage ϕ6, the type member of the virus family. However, the relationship between ϕNN and other cystoviruses is more distant. In general, proteins located in the internal parts of the virion were more conserved than those exposed on the virion surface, a phenomenon previously reported among eukaryotic dsRNA viruses. Structural models of several putative ϕNN proteins propose that cystoviral structures are highly conserved.
© 2015 The Authors.

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Year:  2015        PMID: 25614591     DOI: 10.1099/vir.0.000063

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  7 in total

1.  Characterization of the first double-stranded RNA bacteriophage infecting Pseudomonas aeruginosa.

Authors:  Yuhui Yang; Shuguang Lu; Wei Shen; Xia Zhao; Mengyu Shen; Yinling Tan; Gang Li; Ming Li; Jing Wang; Fuquan Hu; Shuai Le
Journal:  Sci Rep       Date:  2016-12-09       Impact factor: 4.379

Review 2.  Cystoviral RNA-directed RNA polymerases: Regulation of RNA synthesis on multiple time and length scales.

Authors:  Sébastien Alphonse; Ranajeet Ghose
Journal:  Virus Res       Date:  2017-01-16       Impact factor: 3.303

Review 3.  Origins and evolution of viruses of eukaryotes: The ultimate modularity.

Authors:  Eugene V Koonin; Valerian V Dolja; Mart Krupovic
Journal:  Virology       Date:  2015-03-12       Impact factor: 3.616

4.  Next-generation sequencing of dsRNA is greatly improved by treatment with the inexpensive denaturing reagent DMSO.

Authors:  Alexander H Wilcox; Eric Delwart; Samuel L Díaz-Muñoz
Journal:  Microb Genom       Date:  2019-11

Review 5.  RNA Packaging in the Cystovirus Bacteriophages: Dynamic Interactions during Capsid Maturation.

Authors:  Paul Gottlieb; Aleksandra Alimova
Journal:  Int J Mol Sci       Date:  2022-02-28       Impact factor: 5.923

Review 6.  RNA Phage Biology in a Metagenomic Era.

Authors:  Julie Callanan; Stephen R Stockdale; Andrey Shkoporov; Lorraine A Draper; R Paul Ross; Colin Hill
Journal:  Viruses       Date:  2018-07-21       Impact factor: 5.048

Review 7.  Half a Century of Research on Membrane-Containing Bacteriophages: Bringing New Concepts to Modern Virology.

Authors:  Sari Mäntynen; Lotta-Riina Sundberg; Hanna M Oksanen; Minna M Poranen
Journal:  Viruses       Date:  2019-01-18       Impact factor: 5.048

  7 in total

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