Literature DB >> 25603895

Correlation between genetic diversity and environmental suitability: taking uncertainty from ecological niche models into account.

José Alexandre F Diniz-Filho1, Hauanny Rodrigues2, Mariana Pires De Campos Telles3, Guilherme De Oliveira4, Levi Carina Terribile5, Thannya Nascimento Soares3, João Carlos Nabout6.   

Abstract

The hindcast of shifts in the geographical ranges of species as estimated by ecological niche modelling (ENM) has been coupled with phylogeographical patterns, allowing the inference of past processes that drove population differentiation and genetic variability. However, more recently, some studies have suggested that maps of environmental suitability estimated by ENM may be correlated to species' abundance, raising the possibility of using environmental suitability to infer processes related to population demographic dynamics and genetic variability. In both cases, one of the main problems is that there is a wide variation in ENM development methods and climatic models. In this study, we analyse the relationship between heterozygosity (He) and environmental suitability from multiple ENMs for 25 population estimates for Dipteryx alata, a widely distributed, endemic tree species of the Cerrado region of central Brazil. We propose a new approach for generating a statistical distribution of correlations under randomly generated ENM. The confidence intervals from these distributions indicate how model selection with different properties affects the ability to detect a correlation of interest (e.g. the correlation between He and suitability). Additionally, our approach allows us to explore which particular ensemble of ENMs produces the better result for finding an association between environmental suitability and He. Caution is necessary when choosing a method or a climatic data set for modelling geographical distributions, but the new approach proposed here provides a conservative way to evaluate the ability of ensembles to detect patterns of interest.
© 2015 John Wiley & Sons Ltd.

Entities:  

Keywords:  Cerrado; heterozygosity; niche modelling; suitability; tropical tree; uncertainty

Mesh:

Year:  2015        PMID: 25603895     DOI: 10.1111/1755-0998.12374

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  5 in total

1.  Geographically weighted regression as a generalized Wombling to detect barriers to gene flow.

Authors:  José Alexandre Felizola Diniz-Filho; Thannya Nascimento Soares; Mariana Pires de Campos Telles
Journal:  Genetica       Date:  2016-06-29       Impact factor: 1.082

2.  The Impact of Global Climate Change on the Geographic Distribution and Sustainable Harvest of Hancornia speciosa Gomes (Apocynaceae) in Brazil.

Authors:  João Carlos Nabout; Mara Rúbia Magalhães; Marcos Aurélio de Amorim Gomes; Hélida Ferreira da Cunha
Journal:  Environ Manage       Date:  2016-01-22       Impact factor: 3.266

3.  Comparison of genetic variation between northern and southern populations of Lilium cernuum (Liliaceae): Implications for Pleistocene refugia.

Authors:  Mi Yoon Chung; Son Hai Vu; Jordi López-Pujol; Sonia Herrando-Moraira; Sungwon Son; Gang Uk Suh; Hoa Thi Quynh Le; Myong Gi Chung
Journal:  PLoS One       Date:  2018-01-04       Impact factor: 3.240

Review 4.  Global genetic diversity status and trends: towards a suite of Essential Biodiversity Variables (EBVs) for genetic composition.

Authors:  Sean Hoban; Frederick I Archer; Laura D Bertola; Jason G Bragg; Martin F Breed; Michael W Bruford; Melinda A Coleman; Robert Ekblom; W Chris Funk; Catherine E Grueber; Brian K Hand; Rodolfo Jaffé; Evelyn Jensen; Jeremy S Johnson; Francine Kershaw; Libby Liggins; Anna J MacDonald; Joachim Mergeay; Joshua M Miller; Frank Muller-Karger; David O'Brien; Ivan Paz-Vinas; Kevin M Potter; Orly Razgour; Cristiano Vernesi; Margaret E Hunter
Journal:  Biol Rev Camb Philos Soc       Date:  2022-04-12

5.  Geographical patterns in climate and agricultural technology drive soybean productivity in Brazil.

Authors:  Jordana Moura Caetano; Geiziane Tessarolo; Guilherme de Oliveira; Kelly da Silva E Souza; José Alexandre Felizola Diniz-Filho; João Carlos Nabout
Journal:  PLoS One       Date:  2018-01-30       Impact factor: 3.240

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.