Literature DB >> 25591003

Structural convergence of unstructured p53 family transactivation domains in MDM2 recognition.

Jae-Sun Shin1, Ji-Hyang Ha, Dong-Hwa Lee, Kyoung-Seok Ryu, Kwang-Hee Bae, Byoung Chul Park, Sung Goo Park, Gwan-Su Yi, Seung-Wook Chi.   

Abstract

The p53, p63, and p73 proteins belong to the p53 family of transcription factors, which play key roles in tumor suppression. Although the transactivation domains (TADs) of the p53 family are intrinsically disordered, these domains are commonly involved in the regulatory interactions with mouse double minute 2 (MDM2). In this study, we determined the solution structure of the p73TAD peptide in complex with MDM2 using NMR spectroscopy and biophysically characterized the interactions between the p53 family TAD peptides and MDM2. In combination with mutagenesis data, the complex structures revealed remarkably close mimicry of the MDM2 recognition mechanism among the p53 family TADs. Upon binding with MDM2, the intrinsically disordered p73TAD and p63TAD peptides adopt an amphipathic α-helical conformation, which is similar to the conformation of p53TAD, although the α-helical content induced by MDM2 binding varies. With isothermal titration calorimetry (ITC) and circular dichroism (CD) data, our biophysical characterization showed that p73TAD resembles p53TAD more closely than p63TAD in terms of helical stability, MDM2 binding affinity, and phosphorylation effects on MDM2 binding. Therefore, our structural information may be useful in establishing alternative anticancer strategies that exploit the activation of the p73 pathway against human tumors bearing p53 mutations.

Entities:  

Keywords:  AIRs, Ambiguous interaction restraints; HSQC, heteronuclear single quantum coherence; IDP, Intrinsically disordered protein; ITC, Isothermal titration calorimetry; MDM2; MDM2, mouse double minute 2; NMR; NMR, nuclear magnetic resonance; NOESY, nuclear Overhauser effect spectroscopy; RDC, Residual dipolar coupling; TAD, transactivation domain; complex structure; p53 family; p73; transactivation domain

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Substances:

Year:  2015        PMID: 25591003      PMCID: PMC4614862          DOI: 10.1080/15384101.2014.998056

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  46 in total

1.  Molecular mechanism of the interaction between MDM2 and p53.

Authors:  Oliver Schon; Assaf Friedler; Mark Bycroft; Stefan M V Freund; Alan R Fersht
Journal:  J Mol Biol       Date:  2002-10-25       Impact factor: 5.469

2.  p63 is a p53 homologue required for limb and epidermal morphogenesis.

Authors:  A A Mills; B Zheng; X J Wang; H Vogel; D R Roop; A Bradley
Journal:  Nature       Date:  1999-04-22       Impact factor: 49.962

3.  Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Biomol NMR       Date:  2002-11       Impact factor: 2.835

4.  Molecular mimicry-based repositioning of nutlin-3 to anti-apoptotic Bcl-2 family proteins.

Authors:  Ji-Hyang Ha; Eun-Young Won; Jae-Sun Shin; Mi Jang; Kyoung-Seok Ryu; Kwang-Hee Bae; Sung Goo Park; Byoung Chul Park; Ho Sup Yoon; Seung-Wook Chi
Journal:  J Am Chem Soc       Date:  2011-01-06       Impact factor: 15.419

5.  Regulation of p63 function by Mdm2 and MdmX.

Authors:  M Kadakia; C Slader; S J Berberich
Journal:  DNA Cell Biol       Date:  2001-06       Impact factor: 3.311

6.  Dual-site interactions of p53 protein transactivation domain with anti-apoptotic Bcl-2 family proteins reveal a highly convergent mechanism of divergent p53 pathways.

Authors:  Ji-Hyang Ha; Jae-Sun Shin; Mi-Kyung Yoon; Min-Sung Lee; Fahu He; Kwang-Hee Bae; Ho Sup Yoon; Chong-Kil Lee; Sung Goo Park; Yutaka Muto; Seung-Wook Chi
Journal:  J Biol Chem       Date:  2013-01-11       Impact factor: 5.157

7.  p73-deficient mice have neurological, pheromonal and inflammatory defects but lack spontaneous tumours.

Authors:  A Yang; N Walker; R Bronson; M Kaghad; M Oosterwegel; J Bonnin; C Vagner; H Bonnet; P Dikkes; A Sharpe; F McKeon; D Caput
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

8.  Mdm2 promotes the rapid degradation of p53.

Authors:  Y Haupt; R Maya; A Kazaz; M Oren
Journal:  Nature       Date:  1997-05-15       Impact factor: 49.962

9.  Interaction of regulators Mdm2 and Mdmx with transcription factors p53, p63 and p73.

Authors:  Michal Zdzalik; Katarzyna Pustelny; Sylwia Kedracka-Krok; Krzysztof Huben; Aleksandra Pecak; Benedykt Wladyka; Stefan Jankowski; Adam Dubin; Jan Potempa; Grzegorz Dubin
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

Review 10.  p73: Friend or foe in tumorigenesis.

Authors:  Gerry Melino; Vincenzo De Laurenzi; Karen H Vousden
Journal:  Nat Rev Cancer       Date:  2002-08       Impact factor: 60.716

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  12 in total

1.  Accelerating physical simulations of proteins by leveraging external knowledge.

Authors:  Alberto Perez; Joseph A Morrone; Ken A Dill
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2017-04-19

2.  Cytoplasmic pro-apoptotic function of the tumor suppressor p73 is mediated through a modified mode of recognition of the anti-apoptotic regulator Bcl-XL.

Authors:  Mi-Kyung Yoon; Bu-Yeon Kim; Ji-Young Lee; Ji-Hyang Ha; Sung Ah Kim; Dong-Hwa Lee; Min-Sung Lee; Mi-Kyung Lee; Jin Sun Choi; Jin Hwa Cho; Jeong-Hoon Kim; Sunhong Kim; Jaewhan Song; Sung Goo Park; Byoung Chul Park; Kwang-Hee Bae; Sang Un Choi; Seung-Wook Chi
Journal:  J Biol Chem       Date:  2018-11-14       Impact factor: 5.157

3.  Simulation of MDM2 N-terminal domain conformational lability in the presence of imidazoline based inhibitors of MDM2-p53 protein-protein interaction.

Authors:  Maxim Gureev; Daria Novikova; Tatyana Grigoreva; Svetlana Vorona; Alexander Garabadzhiu; Vyacheslav Tribulovich
Journal:  J Comput Aided Mol Des       Date:  2019-11-28       Impact factor: 3.686

4.  AlphaSpace 2.0: Representing Concave Biomolecular Surfaces Using β-Clusters.

Authors:  Joseph Katigbak; Haotian Li; David Rooklin; Yingkai Zhang
Journal:  J Chem Inf Model       Date:  2020-02-11       Impact factor: 4.956

Review 5.  Structure and apoptotic function of p73.

Authors:  Mi-Kyung Yoon; Ji-Hyang Ha; Min-Sung Lee; Seung-Wook Chi
Journal:  BMB Rep       Date:  2015-02       Impact factor: 4.778

Review 6.  The Regulation of Tumor Suppressor p63 by the Ubiquitin-Proteasome System.

Authors:  Stephen R Armstrong; Hong Wu; Benfan Wang; Yasser Abuetabh; Consolato Sergi; Roger P Leng
Journal:  Int J Mol Sci       Date:  2016-12-06       Impact factor: 5.923

7.  Evolution of the p53-MDM2 pathway.

Authors:  Emma Åberg; Fulvio Saccoccia; Manfred Grabherr; Wai Ying Josefin Ore; Per Jemth; Greta Hultqvist
Journal:  BMC Evol Biol       Date:  2017-08-03       Impact factor: 3.260

8.  Metal cofactor modulated folding and target recognition of HIV-1 NCp7.

Authors:  Weitong Ren; Dongqing Ji; Xiulian Xu
Journal:  PLoS One       Date:  2018-05-01       Impact factor: 3.240

9.  Structural Basis for the Interaction between p53 Transactivation Domain and the Mediator Subunit MED25.

Authors:  Min-Sung Lee; Kyungeun Lim; Mi-Kyung Lee; Seung-Wook Chi
Journal:  Molecules       Date:  2018-10-22       Impact factor: 4.411

Review 10.  Regulation of the p53 Family Proteins by the Ubiquitin Proteasomal Pathway.

Authors:  Scott Bang; Sandeep Kaur; Manabu Kurokawa
Journal:  Int J Mol Sci       Date:  2019-12-30       Impact factor: 5.923

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