Literature DB >> 25589926

Structure-Based Design of Type II Inhibitors Applied to Maternal Embryonic Leucine Zipper Kinase.

Christopher N Johnson1, Christophe Adelinet2, Valerio Berdini1, Lijs Beke3, Pascal Bonnet3, Dirk Brehmer3, Frederick Calo1, Joseph E Coyle1, Phillip J Day1, Martyn Frederickson1, Eddy J E Freyne3, Ron A H J Gilissen3, Christopher C F Hamlett1, Steven Howard1, Lieven Meerpoel3, Laurence Mevellec2, Rachel McMenamin1, Elisabeth Pasquier2, Sahil Patel1, David C Rees1, Joannes T M Linders3.   

Abstract

A novel Type II kinase inhibitor chemotype has been identified for maternal embryonic leucine zipper kinase (MELK) using structure-based ligand design. The strategy involved structural characterization of an induced DFG-out pocket by protein-ligand X-ray crystallography and incorporation of a slender linkage capable of bypassing a large gate-keeper residue, thus enabling design of molecules accessing both hinge and induced pocket regions. Optimization of an initial hit led to the identification of a low-nanomolar, cell-penetrant Type II inhibitor suitable for use as a chemical probe for MELK.

Entities:  

Keywords:  Maternal embryonic leucine zipper kinase; fragment-based drug design; structure-based optimization

Year:  2014        PMID: 25589926      PMCID: PMC4291807          DOI: 10.1021/ml5001273

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  18 in total

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6.  Lead Discovery of Type II BRAF V600E Inhibitors Targeting the Structurally Validated DFG-Out Conformation Based upon Selected Fragments.

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7.  Screening of a Novel Fragment Library with Functional Complexity against Mycobacterium tuberculosis InhA.

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