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Literature DB >> 25585807

Spontaneous mutual ordering of nucleic acids and proteins.

Abstract

It is proposed that the prebiotic ordering of nucleic acid and peptide sequences was a cooperative process in which nearly random populations of both kinds of polymers went through a codependent series of self-organisation events that simultaneously refined not only the accuracy of genetic replication and coding but also the functional specificity of protein catalysts, especially nascent aminoacyl-tRNA synthetase "urzymes".

Entities: Chemical

Mesh：

Substances：

Year: 2015 PMID： 25585807 DOI： 10.1007/s11084-014-9396-z

Source DB: PubMed Journal: Orig Life Evol Biosph ISSN： 0169-6149 Impact factor: 1.950

17 in total

1. Evolutionary self-organization of cell-free genetic coding.

Authors: R M Füchslin; J S McCaskill
Journal: Proc Natl Acad Sci U S A Date: 2001-07-24 Impact factor: 11.205

2. On protein synthesis.

Authors: F H CRICK
Journal: Symp Soc Exp Biol Date: 1958

3. Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis.

Authors: Marko Mocibob; Nives Ivic; Silvija Bilokapic; Timm Maier; Marija Luic; Nenad Ban; Ivana Weygand-Durasevic
Journal: Proc Natl Acad Sci U S A Date: 2010-07-27 Impact factor: 11.205

4. The transition from noncoded to coded protein synthesis: did coding mRNAs arise from stability-enhancing binding partners to tRNA?

Authors: Harold Stephen Bernhardt; Warren Perry Tate
Journal: Biol Direct Date: 2010-04-09 Impact factor: 4.540

Review 5. Ancient machinery embedded in the contemporary ribosome.

Authors: Matthew J Belousoff; Chen Davidovich; Ella Zimmerman; Yaron Caspi; Itai Wekselman; Lin Rozenszajn; Tal Shapira; Ofir Sade-Falk; Leena Taha; Anat Bashan; Manfred S Weiss; Ada Yonath
Journal: Biochem Soc Trans Date: 2010-04 Impact factor: 5.407

6. RNA aminoacylation mediated by sequential action of two ribozymes and a nonactivated amino acid.

Authors: Jiacui Xu; Bettina Appel; Darko Balke; Claudia Wichert; Sabine Müller
Journal: Chembiochem Date: 2014-04-24 Impact factor: 3.164

7. Fast and accurate nonenzymatic copying of an RNA-like synthetic genetic polymer.

Authors: Shenglong Zhang; J Craig Blain; Daria Zielinska; Sergei M Gryaznov; Jack W Szostak
Journal: Proc Natl Acad Sci U S A Date: 2013-10-07 Impact factor: 11.205

8. Structural phylogenomics retrodicts the origin of the genetic code and uncovers the evolutionary impact of protein flexibility.

Authors: Gustavo Caetano-Anollés; Minglei Wang; Derek Caetano-Anollés
Journal: PLoS One Date: 2013-08-21 Impact factor: 3.240

Spontaneous mutual ordering of nucleic acids and proteins.

1. Evolutionary self-organization of cell-free genetic coding.

2. On protein synthesis.

3. Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis.

4. The transition from noncoded to coded protein synthesis: did coding mRNAs arise from stability-enhancing binding partners to tRNA?

Review 5. Ancient machinery embedded in the contemporary ribosome.

6. RNA aminoacylation mediated by sequential action of two ribozymes and a nonactivated amino acid.

7. Fast and accurate nonenzymatic copying of an RNA-like synthetic genetic polymer.

8. Structural phylogenomics retrodicts the origin of the genetic code and uncovers the evolutionary impact of protein flexibility.

9. Functional proteins from a random-sequence library.

10. An extension of the coevolution theory of the origin of the genetic code.

1. Emergence of coding and its specificity as a physico-informatic problem.

Review 2. Experimental solutions to problems defining the origin of codon-directed protein synthesis.

3. The Ancient Operational Code is Embedded in the Amino Acid Substitution Matrix and aaRS Phylogenies.

4. Backbone Brackets and Arginine Tweezers delineate Class I and Class II aminoacyl tRNA synthetases.

5. The structural basis of the genetic code: amino acid recognition by aminoacyl-tRNA synthetases.

6. Impedance Matching and the Choice Between Alternative Pathways for the Origin of Genetic Coding.

7. Interdependence, Reflexivity, Fidelity, Impedance Matching, and the Evolution of Genetic Coding.