Literature DB >> 25584366

Genetics of Path Lengths in Brain Connectivity Networks: HARDI-Based Maps in 457 Adults.

Neda Jahanshad1, Gautam Prasad2, Arthur W Toga3, Katie L McMahon4, Greig I de Zubicaray, Nicholas G Martin, Margaret J Wright, Paul M Thompson.   

Abstract

Brain connectivity analyses are increasingly popular for investigating organization. Many connectivity measures including path lengths are generally defined as the number of nodes traversed to connect a node in a graph to the others. Despite its name, path length is purely topological, and does not take into account the physical length of the connections. The distance of the trajectory may also be highly relevant, but is typically overlooked in connectivity analyses. Here we combined genotyping, anatomical MRI and HARDI to understand how our genes influence the cortical connections, using whole-brain tractography. We defined a new measure, based on Dijkstra's algorithm, to compute path lengths for tracts connecting pairs of cortical regions. We compiled these measures into matrices where elements represent the physical distance traveled along tracts. We then analyzed a large cohort of healthy twins and show that our path length measure is reliable, heritable, and influenced even in young adults by the Alzheimer's risk gene, CLU.

Entities:  

Keywords:  Dijkstra’s algorithm; HARDI tractography; Structural connectivity; neuroimaging genetics; path length

Year:  2012        PMID: 25584366      PMCID: PMC4288784          DOI: 10.1007/978-3-642-33530-3_3

Source DB:  PubMed          Journal:  Multimodal Brain Image Anal (2012)


  17 in total

1.  Genetic influences on brain structure.

Authors:  P M Thompson; T D Cannon; K L Narr; T van Erp; V P Poutanen; M Huttunen; J Lönnqvist; C G Standertskjöld-Nordenstam; J Kaprio; M Khaledy; R Dail; C I Zoumalan; A W Toga
Journal:  Nat Neurosci       Date:  2001-12       Impact factor: 24.884

2.  Altered structural brain connectivity in healthy carriers of the autism risk gene, CNTNAP2.

Authors:  Emily L Dennis; Neda Jahanshad; Jeffrey D Rudie; Jesse A Brown; Kori Johnson; Katie L McMahon; Greig I de Zubicaray; Grant Montgomery; Nicholas G Martin; Margaret J Wright; Susan Y Bookheimer; Mirella Dapretto; Arthur W Toga; Paul M Thompson
Journal:  Brain Connect       Date:  2011

3.  A genome-wide search for genetic influences and biological pathways related to the brain's white matter integrity.

Authors:  Lorna M Lopez; Mark E Bastin; Susana Muñoz Maniega; Lars Penke; Gail Davies; Andrea Christoforou; Maria C Valdés Hernández; Natalie A Royle; Albert Tenesa; John M Starr; David J Porteous; Joanna M Wardlaw; Ian J Deary
Journal:  Neurobiol Aging       Date:  2012-03-16       Impact factor: 4.673

4.  An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.

Authors:  Rahul S Desikan; Florent Ségonne; Bruce Fischl; Brian T Quinn; Bradford C Dickerson; Deborah Blacker; Randy L Buckner; Anders M Dale; R Paul Maguire; Bradley T Hyman; Marilyn S Albert; Ronald J Killiany
Journal:  Neuroimage       Date:  2006-03-10       Impact factor: 6.556

5.  Complex network measures of brain connectivity: uses and interpretations.

Authors:  Mikail Rubinov; Olaf Sporns
Journal:  Neuroimage       Date:  2009-10-09       Impact factor: 6.556

6.  Brain network local interconnectivity loss in aging APOE-4 allele carriers.

Authors:  Jesse A Brown; Kevin H Terashima; Alison C Burggren; Linda M Ercoli; Karen J Miller; Gary W Small; Susan Y Bookheimer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-21       Impact factor: 11.205

7.  Genome-wide association study identifies variants at CLU and PICALM associated with Alzheimer's disease.

Authors:  Denise Harold; Richard Abraham; Paul Hollingworth; Rebecca Sims; Amy Gerrish; Marian L Hamshere; Jaspreet Singh Pahwa; Valentina Moskvina; Kimberley Dowzell; Amy Williams; Nicola Jones; Charlene Thomas; Alexandra Stretton; Angharad R Morgan; Simon Lovestone; John Powell; Petroula Proitsi; Michelle K Lupton; Carol Brayne; David C Rubinsztein; Michael Gill; Brian Lawlor; Aoibhinn Lynch; Kevin Morgan; Kristelle S Brown; Peter A Passmore; David Craig; Bernadette McGuinness; Stephen Todd; Clive Holmes; David Mann; A David Smith; Seth Love; Patrick G Kehoe; John Hardy; Simon Mead; Nick Fox; Martin Rossor; John Collinge; Wolfgang Maier; Frank Jessen; Britta Schürmann; Reinhard Heun; Hendrik van den Bussche; Isabella Heuser; Johannes Kornhuber; Jens Wiltfang; Martin Dichgans; Lutz Frölich; Harald Hampel; Michael Hüll; Dan Rujescu; Alison M Goate; John S K Kauwe; Carlos Cruchaga; Petra Nowotny; John C Morris; Kevin Mayo; Kristel Sleegers; Karolien Bettens; Sebastiaan Engelborghs; Peter P De Deyn; Christine Van Broeckhoven; Gill Livingston; Nicholas J Bass; Hugh Gurling; Andrew McQuillin; Rhian Gwilliam; Panagiotis Deloukas; Ammar Al-Chalabi; Christopher E Shaw; Magda Tsolaki; Andrew B Singleton; Rita Guerreiro; Thomas W Mühleisen; Markus M Nöthen; Susanne Moebus; Karl-Heinz Jöckel; Norman Klopp; H-Erich Wichmann; Minerva M Carrasquillo; V Shane Pankratz; Steven G Younkin; Peter A Holmans; Michael O'Donovan; Michael J Owen; Julie Williams
Journal:  Nat Genet       Date:  2009-09-06       Impact factor: 38.330

8.  Test-retest reliability of graph theory measures of structural brain connectivity.

Authors:  Emily L Dennis; Neda Jahanshad; Arthur W Toga; Katie L McMahon; Greig I de Zubicaray; Nicholas G Martin; Margaret J Wright; Paul M Thompson
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

9.  Abnormal connectivity in the posterior cingulate and hippocampus in early Alzheimer's disease and mild cognitive impairment.

Authors:  Yongxia Zhou; John H Dougherty; Karl F Hubner; Bing Bai; Rex L Cannon; R Kent Hutson
Journal:  Alzheimers Dement       Date:  2008-07       Impact factor: 21.566

10.  Estimating distributed anatomical connectivity using fast marching methods and diffusion tensor imaging.

Authors:  Geoffrey J M Parker; Claudia A M Wheeler-Kingshott; Gareth J Barker
Journal:  IEEE Trans Med Imaging       Date:  2002-05       Impact factor: 10.048

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  6 in total

1.  Development of the brain's structural network efficiency in early adolescence: A longitudinal DTI twin study.

Authors:  Marinka M G Koenis; Rachel M Brouwer; Martijn P van den Heuvel; René C W Mandl; Inge L C van Soelen; René S Kahn; Dorret I Boomsma; Hilleke E Hulshoff Pol
Journal:  Hum Brain Mapp       Date:  2015-09-14       Impact factor: 5.038

2.  Voxelwise spectral diffusional connectivity and its applications to Alzheimer's disease and intelligence prediction.

Authors:  Junning Li; Yan Jin; Yonggang Shi; Ivo D Dinov; Danny J Wang; Arthur W Toga; Paul M Thompson
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

3.  Heritability of structural brain network topology: a DTI study of 156 twins.

Authors:  Marc M Bohlken; René C W Mandl; Rachel M Brouwer; Martijn P van den Heuvel; Anna M Hedman; René S Kahn; Hilleke E Hulshoff Pol
Journal:  Hum Brain Mapp       Date:  2014-05-21       Impact factor: 5.038

4.  Diffusion weighted imaging-based maximum density path analysis and classification of Alzheimer's disease.

Authors:  Talia M Nir; Julio E Villalon-Reina; Gautam Prasad; Neda Jahanshad; Shantanu H Joshi; Arthur W Toga; Matt A Bernstein; Clifford R Jack; Michael W Weiner; Paul M Thompson
Journal:  Neurobiol Aging       Date:  2014-08-27       Impact factor: 4.673

Review 5.  Genetics of the connectome.

Authors:  Paul M Thompson; Tian Ge; David C Glahn; Neda Jahanshad; Thomas E Nichols
Journal:  Neuroimage       Date:  2013-05-21       Impact factor: 6.556

Review 6.  Genetic variants in Alzheimer disease - molecular and brain network approaches.

Authors:  Chris Gaiteri; Sara Mostafavi; Christopher J Honey; Philip L De Jager; David A Bennett
Journal:  Nat Rev Neurol       Date:  2016-06-10       Impact factor: 42.937

  6 in total

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