Literature DB >> 25580719

Conservation genetics and genomics of amphibians and reptiles.

H Bradley Shaffer1, Müge Gidiş, Evan McCartney-Melstad, Kevin M Neal, Hilton M Oyamaguchi, Marisa Tellez, Erin M Toffelmier.   

Abstract

Amphibians and reptiles as a group are often secretive, reach their greatest diversity often in remote tropical regions, and contain some of the most endangered groups of organisms on earth. Particularly in the past decade, genetics and genomics have been instrumental in the conservation biology of these cryptic vertebrates, enabling work ranging from the identification of populations subject to trade and exploitation, to the identification of cryptic lineages harboring critical genetic variation, to the analysis of genes controlling key life history traits. In this review, we highlight some of the most important ways that genetic analyses have brought new insights to the conservation of amphibians and reptiles. Although genomics has only recently emerged as part of this conservation tool kit, several large-scale data sources, including full genomes, expressed sequence tags, and transcriptomes, are providing new opportunities to identify key genes, quantify landscape effects, and manage captive breeding stocks of at-risk species.

Entities:  

Keywords:  captive breeding; endangered species; hybridization; landscape genetics; management units; phylogenetic prioritization

Mesh:

Year:  2015        PMID: 25580719     DOI: 10.1146/annurev-animal-022114-110920

Source DB:  PubMed          Journal:  Annu Rev Anim Biosci        ISSN: 2165-8102            Impact factor:   8.923


  12 in total

Review 1.  A review on the conservation genetic studies of Indian amphibians and their implications on developing strategies for conservation.

Authors:  Priti Hebbar; G Ravikanth; N A Aravind
Journal:  J Genet       Date:  2019-12       Impact factor: 1.166

2.  Sequencing smart: De novo sequencing and assembly approaches for a non-model mammal.

Authors:  Graham J Etherington; Darren Heavens; David Baker; Ashleigh Lister; Rose McNelly; Gonzalo Garcia; Bernardo Clavijo; Iain Macaulay; Wilfried Haerty; Federica Di Palma
Journal:  Gigascience       Date:  2020-05-01       Impact factor: 6.524

3.  An integrative taxonomic revision of slug-eating snakes (Squamata: Pareidae: Pareineae) reveals unprecedented diversity in Indochina.

Authors:  Nikolay A Poyarkov; Tan Van Nguyen; Parinya Pawangkhanant; Platon V Yushchenko; Peter Brakels; Linh Hoang Nguyen; Hung Ngoc Nguyen; Chatmongkon Suwannapoom; Nikolai Orlov; Gernot Vogel
Journal:  PeerJ       Date:  2022-01-10       Impact factor: 2.984

4.  Discovery of a wild, genetically pure Chinese giant salamander creates new conservation opportunities.

Authors:  Jing Chai; Chen-Qi Lu; Mu-Rong Yi; Nian-Hua Dai; Xiao-Dong Weng; Ming-Xiao Di; Yong Peng; Yong Tang; Qing-Hua Shan; Kai Wang; Huan-Zhang Liu; Hai-Peng Zhao; Jie-Qiong Jin; Ru-Jun Cao; Ping Lu; Lai-Chun Luo; Robert W Murphy; Ya-Ping Zhang; Jing Che
Journal:  Zool Res       Date:  2022-05-18

5.  Multiple uprising invasions of Pelophylax water frogs, potentially inducing a new hybridogenetic complex.

Authors:  Christophe Dufresnes; Mathieu Denoël; Lionel di Santo; Sylvain Dubey
Journal:  Sci Rep       Date:  2017-07-26       Impact factor: 4.379

6.  Conservation genetics of the eastern yellow-bellied racer (Coluber constrictor flaviventris) and bullsnake (Pituophis catenifer sayi): River valleys are critical features for snakes at northern range limits.

Authors:  Christopher M Somers; Carly F Graham; Jessica A Martino; Timothy R Frasier; Stacey L Lance; Laura E Gardiner; Ray G Poulin
Journal:  PLoS One       Date:  2017-11-02       Impact factor: 3.240

Review 7.  Evolutionary principles guiding amphibian conservation.

Authors:  Maciej Pabijan; Gemma Palomar; Bernardo Antunes; Weronika Antoł; Piotr Zieliński; Wiesław Babik
Journal:  Evol Appl       Date:  2020-03-13       Impact factor: 5.183

8.  Genetic Structure and Eco-Geographical Differentiation of Wild Sheep Fescue (Festuca ovina L.) in Xinjiang, Northwest China.

Authors:  Chenglin Zhang; Jianbo Zhang; Yan Fan; Ming Sun; Wendan Wu; Wenda Zhao; Xiaopeng Yang; Linkai Huang; Yan Peng; Xiao Ma; Xinquan Zhang
Journal:  Molecules       Date:  2017-08-09       Impact factor: 4.411

Review 9.  Integrating Genomic Data Sets for Knowledge Discovery: An Informed Approach to Management of Captive Endangered Species.

Authors:  Kristopher J L Irizarry; Doug Bryant; Jordan Kalish; Curtis Eng; Peggy L Schmidt; Gini Barrett; Margaret C Barr
Journal:  Int J Genomics       Date:  2016-06-08       Impact factor: 2.326

Review 10.  Perspectives on studying molecular adaptations of amphibians in the genomic era.

Authors:  Yan-Bo Sun; Yi Zhang; Kai Wang
Journal:  Zool Res       Date:  2020-07-18
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