Literature DB >> 25576225

Doubling up on the fly: NeuroMorpho.Org Meets Big Data.

Sumit Nanda1, M Mowafak Allaham, Maurizio Bergamino, Sridevi Polavaram, Rubén Armañanzas, Giorgio A Ascoli, Ruchi Parekh.   

Abstract

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Year:  2015        PMID： 25576225      PMCID： PMC4725293          DOI： 10.1007/s12021-014-9257-y

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN： 1539-2791


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  16 in total

1.  The Virtual Fly Brain browser and query interface.

Authors:  Nestor Milyaev; David Osumi-Sutherland; Simon Reeve; Nicholas Burton; Richard A Baldock; J Douglas Armstrong
Journal:  Bioinformatics       Date:  2011-12-16       Impact factor: 6.937

2.  The past, present, and future of single neuron reconstruction.

Authors:  Karel Svoboda
Journal:  Neuroinformatics       Date:  2011-09

3.  The DIADEM and beyond.

Authors:  Yuan Liu
Journal:  Neuroinformatics       Date:  2011-09

4.  Cell class-specific regulation of neocortical dendrite and spine growth by AMPA receptor splice and editing variants.

Authors:  Mohammad I K Hamad; Zhan-Lu Ma-Högemeier; Christian Riedel; Claudius Conrads; Thomas Veitinger; Tim Habijan; Jan-Niklas Schulz; Martin Krause; Marcus J Wirth; Michael Hollmann; Petra Wahle
Journal:  Development       Date:  2011-08-24       Impact factor: 6.868

5.  APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree.

Authors:  Hang Xiao; Hanchuan Peng
Journal:  Bioinformatics       Date:  2013-04-19       Impact factor: 6.937

Review 6.  Neuronal morphology goes digital: a research hub for cellular and system neuroscience.

Authors:  Ruchi Parekh; Giorgio A Ascoli
Journal:  Neuron       Date:  2013-03-20       Impact factor: 17.173

7.  High-throughput computer method for 3D neuronal structure reconstruction from the image stack of the Drosophila brain and its applications.

Authors:  Ping-Chang Lee; Chao-Chun Chuang; Ann-Shyn Chiang; Yu-Tai Ching
Journal:  PLoS Comput Biol       Date:  2012-09-13       Impact factor: 4.475

8.  Digital reconstructions of neuronal morphology: three decades of research trends.

Authors:  Maryam Halavi; Kelly A Hamilton; Ruchi Parekh; Giorgio A Ascoli
Journal:  Front Neurosci       Date:  2012-04-23       Impact factor: 4.677

9.  Distribution and morphology of nitrergic neurons across functional domains of the rat primary somatosensory cortex.

Authors:  Anaelli A Nogueira-Campos; Deborah M Finamore; Luis A Imbiriba; Jean C Houzel; João G Franca
Journal:  Front Neural Circuits       Date:  2012-11-06       Impact factor: 3.492

10.  FlyBase 102--advanced approaches to interrogating FlyBase.

Authors:  Susan E St Pierre; Laura Ponting; Raymund Stefancsik; Peter McQuilton
Journal:  Nucleic Acids Res       Date:  2013-11-13       Impact factor: 16.971
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  6 in total

1.  Highlights from the Era of Open Source Web-Based Tools.

Authors:  Kristin R Anderson; Julie A Harris; Lydia Ng; Pjotr Prins; Sara Memar; Bengt Ljungquist; Daniel Fürth; Robert W Williams; Giorgio A Ascoli; Dani Dumitriu
Journal:  J Neurosci       Date:  2021-01-20       Impact factor: 6.167

2.  Turning the Tide of Data Sharing.

Authors:  Giorgio A Ascoli
Journal:  Neuroinformatics       Date:  2019-10

3.  The natverse, a versatile toolbox for combining and analysing neuroanatomical data.

Authors:  Alexander Shakeel Bates; James D Manton; Sridhar R Jagannathan; Marta Costa; Philipp Schlegel; Torsten Rohlfing; Gregory Sxe Jefferis
Journal:  Elife       Date:  2020-04-14       Impact factor: 8.140

4.  Data Publications Correlate with Citation Impact.

Authors:  Florian Leitner; Concha Bielza; Sean L Hill; Pedro Larrañaga
Journal:  Front Neurosci       Date:  2016-09-13       Impact factor: 4.677

5.  An open repository for single-cell reconstructions of the brain forest.

Authors:  Masood A Akram; Sumit Nanda; Patricia Maraver; Rubén Armañanzas; Giorgio A Ascoli
Journal:  Sci Data       Date:  2018-02-27       Impact factor: 6.444

Review 6.  Mining Big Neuron Morphological Data.

Authors:  Maryamossadat Aghili; Ruogu Fang
Journal:  Comput Intell Neurosci       Date:  2018-06-24
  6 in total

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