Literature DB >> 25575829

Gynuella sunshinyii gen. nov., sp. nov., an antifungal rhizobacterium isolated from a halophyte, Carex scabrifolia Steud.

Eu Jin Chung1, Jeong Ae Park1, Che Ok Jeon2, Young Ryun Chung1.   

Abstract

An antifungal bacterial strain, designated YC6258(T), was isolated from the rhizosphere of a halophyte (Carex scabrifolia Steud.) growing in a tidal flat area of Namhae Island, Korea. Cells of the strain were Gram-stain-negative, facultatively anaerobic, moderately halophilic, rod-shaped and motile by a single polar flagellum. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain YC6258(T) formed a phyletic lineage distinct from members of the most closely related genera, Saccharospirillum and Reinekea, with less than 91.2 % sequence similarities. The major cellular fatty acids were C18 : 1ω7c, C16 : 0 and Summed feature 3 (C16 : 1ω7c/ C16 : 1ω6c). The quinone system of strain YC6258(T) consisted mainly of ubiquinone Q-8. The polar lipid profile exhibited phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and unknown lipids. The DNA G+C content was 48.9 mol%. Based on the phylogenetic and phenotypic characteristics, strain YC6258(T) should be classified as a representative of a novel species in a novel genus for which the name Gynuella sunshinyii gen. nov., sp. nov. is proposed. The type strain is YC6258(T) (KCCM 43015(T) = NBRC 109345(T)).
© 2015 IUMS.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25575829     DOI: 10.1099/ijs.0.000060

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Genome-based discovery and total synthesis of janustatins, potent cytotoxins from a plant-associated bacterium.

Authors:  Reiko Ueoka; Philipp Sondermann; Stefan Leopold-Messer; Yizhou Liu; Rei Suo; Agneya Bhushan; Lida Vadakumchery; Ute Greczmiel; Yoko Yashiroda; Hiromi Kimura; Shinichi Nishimura; Yojiro Hoshikawa; Minoru Yoshida; Annette Oxenius; Shigeki Matsunaga; R Thomas Williamson; Erick M Carreira; Jörn Piel
Journal:  Nat Chem       Date:  2022-09-05       Impact factor: 24.274

2.  Automated structure prediction of trans-acyltransferase polyketide synthase products.

Authors:  Eric J N Helfrich; Reiko Ueoka; Alon Dolev; Michael Rust; Roy A Meoded; Agneya Bhushan; Gianmaria Califano; Rodrigo Costa; Muriel Gugger; Christoph Steinbeck; Pablo Moreno; Jörn Piel
Journal:  Nat Chem Biol       Date:  2019-07-15       Impact factor: 15.040

3.  Evolution of combinatorial diversity in trans-acyltransferase polyketide synthase assembly lines across bacteria.

Authors:  Eric J N Helfrich; Reiko Ueoka; Marc G Chevrette; Franziska Hemmerling; Xiaowen Lu; Stefan Leopold-Messer; Hannah A Minas; Adrien Y Burch; Steven E Lindow; Jörn Piel; Marnix H Medema
Journal:  Nat Commun       Date:  2021-03-03       Impact factor: 14.919

4.  Genome Mining of Oxidation Modules in trans-Acyltransferase Polyketide Synthases Reveals a Culturable Source for Lobatamides.

Authors:  Reiko Ueoka; Roy A Meoded; Alejandro Gran-Scheuch; Agneya Bhushan; Marco W Fraaije; Jörn Piel
Journal:  Angew Chem Int Ed Engl       Date:  2020-03-19       Impact factor: 15.336

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.