Literature DB >> 25574437

Wavelet based feature extraction and visualization in hyperspectral tissue characterization.

Martin Denstedt1, Asgeir Bjorgan1, Matija Milanič1, Lise Lyngsnes Randeberg1.   

Abstract

Hyperspectral images of tissue contain extensive and complex information relevant for clinical applications. In this work, wavelet decomposition is explored for feature extraction from such data. Wavelet methods are simple and computationally effective, and can be implemented in real-time. The aim of this study was to correlate results from wavelet decomposition in the spectral domain with physical parameters (tissue oxygenation, blood and melanin content). Wavelet decomposition was tested on Monte Carlo simulations, measurements of a tissue phantom and hyperspectral data from a human volunteer during an occlusion experiment. Reflectance spectra were decomposed, and the coefficients were correlated to tissue parameters. This approach was used to identify wavelet components that can be utilized to map levels of blood, melanin and oxygen saturation. The results show a significant correlation (p <0.02) between the chosen tissue parameters and the selected wavelet components. The tissue parameters could be mapped using a subset of the calculated components due to redundancy in spectral information. Vessel structures are well visualized. Wavelet analysis appears as a promising tool for extraction of spectral features in skin. Future studies will aim at developing quantitative mapping of optical properties based on wavelet decomposition.

Entities:  

Keywords:  (070.4790) Spectrum analysis; (100.7410) Wavelets; (110.4234) Multispectral and hyperspectral imaging; (170.3660) Light propagation in tissues; (170.6510) Spectroscopy, tissue diagnostics; (170.6935) Tissue characterization; (300.6550) Spectroscopy, visible

Year:  2014        PMID: 25574437      PMCID: PMC4285604          DOI: 10.1364/BOE.5.004260

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  16 in total

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Authors:  Dmitry Yudovsky; Aksone Nouvong; Laurent Pilon
Journal:  J Diabetes Sci Technol       Date:  2010-09-01

2.  Three-dimensional Monte Carlo model of pulsed-laser treatment of cutaneous vascular lesions.

Authors:  Matija Milanic; Boris Majaron
Journal:  J Biomed Opt       Date:  2011-12       Impact factor: 3.170

3.  Cerebral and muscle oxygen saturation measurement by frequency-domain near-infra-red spectrometer.

Authors:  R A De Blasi; S Fantini; M A Franceschini; M Ferrari; E Gratton
Journal:  Med Biol Eng Comput       Date:  1995-03       Impact factor: 2.602

4.  Determination of visible near-IR absorption coefficients of mammalian fat using time- and spatially resolved diffuse reflectance and transmission spectroscopy.

Authors:  R L P van Veen; H J C M Sterenborg; A Pifferi; A Torricelli; E Chikoidze; R Cubeddu
Journal:  J Biomed Opt       Date:  2005 Sep-Oct       Impact factor: 3.170

Review 5.  Optical properties of biological tissues: a review.

Authors:  Steven L Jacques
Journal:  Phys Med Biol       Date:  2013-05-10       Impact factor: 3.609

6.  Estimation of skin optical parameters for real-time hyperspectral imaging applications.

Authors:  Asgeir Bjorgan; Matija Milanic; Lise Lyngsnes Randeberg
Journal:  J Biomed Opt       Date:  2014-06       Impact factor: 3.170

7.  Optical properties of normal and cancerous human skin in the visible and near-infrared spectral range.

Authors:  Elena Salomatina; Brian Jiang; John Novak; Anna N Yaroslavsky
Journal:  J Biomed Opt       Date:  2006 Nov-Dec       Impact factor: 3.170

8.  The optics of human skin.

Authors:  R R Anderson; J A Parrish
Journal:  J Invest Dermatol       Date:  1981-07       Impact factor: 8.551

9.  Time-dependent blood flow and oxygenation in human skeletal muscles measured with noninvasive near-infrared diffuse optical spectroscopies.

Authors:  Guoqiang Yu; Turgut Durduran; Gwen Lech; Chao Zhou; Britton Chance; Emile R Mohler; Arjun G Yodh
Journal:  J Biomed Opt       Date:  2005 Mar-Apr       Impact factor: 3.170

10.  In vivo measurement of skin erythema and pigmentation: new means of implementation of diffuse reflectance spectroscopy with a commercial instrument.

Authors:  G N Stamatas; B Z Zmudzka; N Kollias; J Z Beer
Journal:  Br J Dermatol       Date:  2008-05-28       Impact factor: 9.302

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  2 in total

1.  Broadband hyperspectral imaging for breast tumor detection using spectral and spatial information.

Authors:  Esther Kho; Behdad Dashtbozorg; Lisanne L de Boer; Koen K Van de Vijver; Henricus J C M Sterenborg; Theo J M Ruers
Journal:  Biomed Opt Express       Date:  2019-08-07       Impact factor: 3.732

2.  Layer thickness prediction and tissue classification in two-layered tissue structures using diffuse reflectance spectroscopy.

Authors:  Freija Geldof; Behdad Dashtbozorg; Benno H W Hendriks; Henricus J C M Sterenborg; Theo J M Ruers
Journal:  Sci Rep       Date:  2022-02-01       Impact factor: 4.996

  2 in total

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