Literature DB >> 25564856

NMR-detected brownian dynamics of αB-crystallin over a wide range of concentrations.

Matthias Roos1, Susanne Link1, Jochen Balbach1, Alexey Krushelnitsky2, Kay Saalwächter3.   

Abstract

Knowledge about the global translational and rotational motion of proteins under crowded conditions is highly relevant for understanding the function of proteins in vivo. This holds in particular for human αB-crystallin, which is strongly crowded in vivo and inter alia responsible for preventing cataracts. Quantitative information on translational and rotational diffusion is not readily available, and we here demonstrate an approach that combines pulsed-field-gradient NMR for translational diffusion and proton T1ρ/T2 relaxation-time measurements for rotational diffusion, thus overcoming obstacles encountered in previous studies. The relaxation times measured at variable temperature provide a quantitative measure of the correlation function of protein tumbling, which cannot be approximated by a single exponential, because two components are needed for a minimal and adequate description of the data. We find that at high protein concentrations, rotational diffusion is decoupled from translational diffusion, the latter following the macroscopic viscosity change almost quantitatively, resembling the behavior of spherical colloids. Analysis of data reported in the literature shows that well-packed globular proteins follow a scaling relation between the hydrodynamic radius and the molar mass, Rh ∼ M(1/d), with a fractal dimension of d ∼ 2.5 rather than 3. Despite its oligomeric nature, Rh of αB-crystallin as derived from both NMR methods is found to be fully consistent with this relation.
Copyright © 2015 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 25564856      PMCID: PMC4286604          DOI: 10.1016/j.bpj.2014.11.1858

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  37 in total

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9.  15N relaxation study of the cold shock protein CspB at various solvent viscosities.

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10.  Subunit exchange of alphaA-crystallin.

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4.  The "long tail" of the protein tumbling correlation function: observation by (1)H NMR relaxometry in a wide frequency and concentration range.

Authors:  Matthias Roos; Marius Hofmann; Susanne Link; Maria Ott; Jochen Balbach; Ernst Rössler; Kay Saalwächter; Alexey Krushelnitsky
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Authors:  Stephen Barnes; Roy A Quinlan
Journal:  Exp Eye Res       Date:  2016-03-31       Impact factor: 3.467

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