Literature DB >> 25561511

Genomic classifier ColoPrint predicts recurrence in stage II colorectal cancer patients more accurately than clinical factors.

Scott Kopetz1, Josep Tabernero2, Robert Rosenberg2, Zhi-Qin Jiang2, Víctor Moreno2, Thomas Bachleitner-Hofmann2, Giovanni Lanza2, Lisette Stork-Sloots2, Dipen Maru2, Iris Simon2, Gabriel Capellà2, Ramon Salazar2.   

Abstract

BACKGROUND: Approximately 20% of patients with stage II colorectal cancer will experience a relapse. Current clinical-pathologic stratification factors do not allow clear identification of these high-risk patients. ColoPrint (Agendia, Amsterdam, The Netherlands, http://www.agendia.com) is a gene expression classifier that distinguishes patients with low or high risk of disease relapse.
METHODS: ColoPrint was developed using whole-genome expression data and validated in several independent validation cohorts. Stage II patients from these studies were pooled (n = 416), and ColoPrint was compared with clinical risk factors described in the National Comprehensive Cancer Network (NCCN) 2013 Guidelines for Colon Cancer. Median follow-up was 81 months. Most patients (70%) did not receive adjuvant chemotherapy. Risk of relapse (ROR) was defined as survival until first event of recurrence or death from cancer.
RESULTS: In the pooled stage II data set, ColoPrint identified 63% of patients as low risk with a 5-year ROR of 10%, whereas high-risk patients (37%) had a 5-year ROR of 21%, with a hazard ratio (HR) of 2.16 (p = .004). This remained significant in a multivariate model that included number of lymph nodes retrieved and microsatellite instability. In the T3 microsatellite-stable subgroup (n = 301), ColoPrint classified 59% of patients as low risk with a 5-year ROR of 9.9%. High-risk patients (31%) had a 22.4% ROR (HR: 2.41; p = .005). In contrast, the NCCN clinical high-risk factors were unable to distinguish high- and low-risk patients (15% vs. 13% ROR; p = .55).
CONCLUSION: ColoPrint significantly improved prognostic accuracy independent of microsatellite status or clinical variables, facilitating the identification of patients at higher risk who might be considered for additional treatment. ©AlphaMed Press.

Entities:  

Keywords:  Gene expression signature; Risk classification; Risk prediction; Stage II colon cancer

Mesh:

Year:  2015        PMID: 25561511      PMCID: PMC4319631          DOI: 10.1634/theoncologist.2014-0325

Source DB:  PubMed          Journal:  Oncologist        ISSN: 1083-7159


  24 in total

1.  Multiple gene expression classifiers from different array platforms predict poor prognosis of colorectal cancer.

Authors:  Yu-Hsin Lin; Jan Friederichs; Michael A Black; Jörg Mages; Robert Rosenberg; Parry J Guilford; Vicky Phillips; Mark Thompson-Fawcett; Nikola Kasabov; Tumi Toro; Arend E Merrie; Andre van Rij; Han-Seung Yoon; John L McCall; Jörg Rüdiger Siewert; Bernhard Holzmann; Anthony E Reeve
Journal:  Clin Cancer Res       Date:  2007-01-15       Impact factor: 12.531

2.  Gene expression signature to improve prognosis prediction of stage II and III colorectal cancer.

Authors:  Ramon Salazar; Paul Roepman; Gabriel Capella; Victor Moreno; Iris Simon; Christa Dreezen; Adriana Lopez-Doriga; Cristina Santos; Corrie Marijnen; Johan Westerga; Sjoerd Bruin; David Kerr; Peter Kuppen; Cornelis van de Velde; Hans Morreau; Loes Van Velthuysen; Annuska M Glas; Laura J Van't Veer; Rob Tollenaar
Journal:  J Clin Oncol       Date:  2010-11-22       Impact factor: 44.544

Review 3.  Gene expression profiling: decoding breast cancer.

Authors:  Femke de Snoo; Richard Bender; Annuska Glas; Emiel Rutgers
Journal:  Surg Oncol       Date:  2009-12       Impact factor: 3.279

4.  Gene expression profiling predicts clinical outcome of breast cancer.

Authors:  Laura J van 't Veer; Hongyue Dai; Marc J van de Vijver; Yudong D He; Augustinus A M Hart; Mao Mao; Hans L Peterse; Karin van der Kooy; Matthew J Marton; Anke T Witteveen; George J Schreiber; Ron M Kerkhoven; Chris Roberts; Peter S Linsley; René Bernards; Stephen H Friend
Journal:  Nature       Date:  2002-01-31       Impact factor: 49.962

5.  Independent validation of a prognostic genomic signature (ColoPrint) for patients with stage II colon cancer.

Authors:  Matthias Maak; Iris Simon; Ulrich Nitsche; Paul Roepman; Mireille Snel; Annuska M Glas; Tibor Schuster; Gisela Keller; Eliane Zeestraten; Inès Goossens; Klaus-Peter Janssen; Helmut Friess; Robert Rosenberg
Journal:  Ann Surg       Date:  2013-06       Impact factor: 12.969

6.  Molecular staging for survival prediction of colorectal cancer patients.

Authors:  Steven Eschrich; Ivana Yang; Greg Bloom; Ka Yin Kwong; David Boulware; Alan Cantor; Domenico Coppola; Mogens Kruhøffer; Lauri Aaltonen; Torben F Orntoft; John Quackenbush; Timothy J Yeatman
Journal:  J Clin Oncol       Date:  2005-05-20       Impact factor: 44.544

7.  Stage II colon cancer prognosis prediction by tumor gene expression profiling.

Authors:  Alain Barrier; Pierre-Yves Boelle; François Roser; Jennifer Gregg; Chantal Tse; Didier Brault; François Lacaine; Sidney Houry; Michel Huguier; Brigitte Franc; Antoine Flahault; Antoinette Lemoine; Sandrine Dudoit
Journal:  J Clin Oncol       Date:  2006-09-11       Impact factor: 44.544

Review 8.  Colorectal cancer.

Authors:  David Cunningham; Wendy Atkin; Heinz-Josef Lenz; Henry T Lynch; Bruce Minsky; Bernard Nordlinger; Naureen Starling
Journal:  Lancet       Date:  2010-03-20       Impact factor: 79.321

Review 9.  Biomarkers in early-stage colorectal cancer: ready for prime time?

Authors:  David Church; Rachel Midgley; David Kerr
Journal:  Dig Dis       Date:  2012-11-23       Impact factor: 2.404

10.  Comparison of prognostic genomic predictors in colorectal cancer.

Authors:  Yun-Yong Park; Sung Sook Lee; Jae Yun Lim; Sang Cheol Kim; Sang Bae Kim; Bo Hwa Sohn; In-Sun Chu; Sang Cheul Oh; Eun Sung Park; Woojin Jeong; Sung Soo Kim; Scott Kopetz; Ju-Seog Lee
Journal:  PLoS One       Date:  2013-04-23       Impact factor: 3.240

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  46 in total

1.  Circulating Tumour DNA as a Potential Cost-Effective Biomarker to Reduce Adjuvant Chemotherapy Overtreatment in Stage II Colorectal Cancer.

Authors:  Yat Hang To; Koen Degeling; Suzanne Kosmider; Rachel Wong; Margaret Lee; Catherine Dunn; Grace Gard; Azim Jalali; Vanessa Wong; Maarten IJzerman; Peter Gibbs; Jeanne Tie
Journal:  Pharmacoeconomics       Date:  2021-06-05       Impact factor: 4.981

Review 2.  Integration of advances in social media and mHealth technology are pivotal to successful cancer prevention and control.

Authors:  D Peter O'Leary; Amir Zaheer; H Paul Redmond; Mark A Corrigan
Journal:  Mhealth       Date:  2016-10-20

Review 3.  Advances in Biomarkers: Going Beyond the Carcinoembryonic Antigen.

Authors:  Nicole E Lopez; Carrie Y Peterson
Journal:  Clin Colon Rectal Surg       Date:  2016-09

Review 4.  Adjuvant therapy for stages II and III colon cancer: risk stratification, treatment duration, and future directions.

Authors:  U Bender; Y S Rho; I Barrera; S Aghajanyan; J Acoba; P Kavan
Journal:  Curr Oncol       Date:  2019-11-01       Impact factor: 3.677

5.  Girdin (GIV) Expression as a Prognostic Marker of Recurrence in Mismatch Repair-Proficient Stage II Colon Cancer.

Authors:  Pradipta Ghosh; Jeanne Tie; Andrea Muranyi; Shalini Singh; Patrick Brunhoeber; Katherine Leith; Rebecca Bowermaster; Zhiming Liao; Yifei Zhu; Bonnie LaFleur; Ben Tran; Jayesh Desai; Ian Jones; Matthew Croxford; Rodrigo Jover; Ajay Goel; Paul Waring; Song Hu; Volker Teichgraber; Ulrich-Peter Rohr; Ruediger Ridder; Kandavel Shanmugam; Peter Gibbs
Journal:  Clin Cancer Res       Date:  2016-03-30       Impact factor: 12.531

Review 6.  Accelerating Therapeutic Development through Innovative Trial Design in Colorectal Cancer.

Authors:  Michael Lam; Jonathan M Loree; Allan Anderson Lima Pereira; Yun Shin Chun; Scott Kopetz
Journal:  Curr Treat Options Oncol       Date:  2018-02-27

Review 7.  Colorectal Cancer: Personalized Therapy.

Authors:  Jona Leichsenring; Adrian Koppelle; Ank Reinacher-Schick
Journal:  Gastrointest Tumors       Date:  2015-04-15

8.  Circulating tumor DNA analysis detects minimal residual disease and predicts recurrence in patients with stage II colon cancer.

Authors:  Jeanne Tie; Yuxuan Wang; Cristian Tomasetti; Lu Li; Simeon Springer; Isaac Kinde; Natalie Silliman; Mark Tacey; Hui-Li Wong; Michael Christie; Suzanne Kosmider; Iain Skinner; Rachel Wong; Malcolm Steel; Ben Tran; Jayesh Desai; Ian Jones; Andrew Haydon; Theresa Hayes; Tim J Price; Robert L Strausberg; Luis A Diaz; Nickolas Papadopoulos; Kenneth W Kinzler; Bert Vogelstein; Peter Gibbs
Journal:  Sci Transl Med       Date:  2016-07-06       Impact factor: 17.956

9.  ELF3 Overexpression as Prognostic Biomarker for Recurrence of Stage II Colorectal Cancer.

Authors:  Ayumi Takaoka; Toshiaki Ishikawa; Satoshi Okazaki; Shuichi Watanabe; Fuyuki Miya; Tatsuhiko Tsunoda; Akifumi Kikuchi; Shinichi Yamauchi; Takatoshi Matsuyama; Masanori Tokunaga; Hiroyuki Uetake; Yusuke Kinugasa
Journal:  In Vivo       Date:  2021 Jan-Feb       Impact factor: 2.155

10.  PRPS-ST: A protocol-agnostic self-training method for gene expression-based classification of blood cancers.

Authors:  Aixiang Jiang; Laura K Hilton; Jeffrey Tang; Christopher K Rushton; Bruno M Grande; David W Scott; Ryan D Morin
Journal:  Blood Cancer Discov       Date:  2020-09-10
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