Literature DB >> 25561068

Using Standardized Lexicons for Report Template Validation with LexMap, a Web-based Application.

Jason Hostetter1, Kenneth Wang, Eliot Siegel, Jeremy Durack, James J Morrison.   

Abstract

An enormous amount of data exists in unstructured diagnostic and interventional radiology reports. Free text or non-standardized terminologies limit the ability to parse, extract, and analyze these report data elements. Medical lexicons and ontologies contain standardized terms for relevant concepts including disease entities, radiographic technique, and findings. The use of standardized terms offers the potential to improve reporting consistency and facilitate computer analysis. The purpose of this project was to implement an interface to aid in the creation of standards-compliant reporting templates for use in interventional radiology. Non-standardized procedure report text was analyzed and referenced to RadLex, SNOMED-CT, and LOINC. Using JavaScript, a web application was developed which determined whether exact terms or synonyms in reports existed within these three reference resources. The NCBO BioPortal Annotator web service was used to map terms, and output from this application was used to create an interactive annotated version of the original report. The application was successfully used to analyze and modify five distinct reports for the Society of Interventional Radiology's standardized reporting project.

Mesh:

Year:  2015        PMID: 25561068      PMCID: PMC4441687          DOI: 10.1007/s10278-014-9760-6

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  5 in total

1.  Ontology-assisted analysis of Web queries to determine the knowledge radiologists seek.

Authors:  Daniel L Rubin; Adam Flanders; Woojin Kim; Khan M Siddiqui; Charles E Kahn
Journal:  J Digit Imaging       Date:  2011-02       Impact factor: 4.056

2.  RadLex: a new method for indexing online educational materials.

Authors:  Curtis P Langlotz
Journal:  Radiographics       Date:  2006 Nov-Dec       Impact factor: 5.333

Review 3.  Radiology reporting, past, present, and future: the radiologist's perspective.

Authors:  Bruce I Reiner; Nancy Knight; Eliot L Siegel
Journal:  J Am Coll Radiol       Date:  2007-05       Impact factor: 5.532

4.  Evaluating the completeness of RadLex in the chest radiography domain.

Authors:  Ryan W Woods; John Eng
Journal:  Acad Radiol       Date:  2013-11       Impact factor: 3.173

5.  The open biomedical annotator.

Authors:  Clement Jonquet; Nigam H Shah; Mark A Musen
Journal:  Summit Transl Bioinform       Date:  2009-03-01
  5 in total
  1 in total

1.  A Data-Driven Iterative Approach for Semi-automatically Assessing the Correctness of Medication Value Sets: A Proof of Concept Based on Opioids.

Authors:  Linyi Li; Adela Grando; Abeed Sarker
Journal:  Methods Inf Med       Date:  2021-12-29       Impact factor: 2.176

  1 in total

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