Literature DB >> 25559999

Complete sequencing of an IncX3 plasmid carrying blaNDM-5 allele reveals an early stage in the dissemination of the blaNDM gene.

M Krishnaraju, C Kamatchi, A K Jha, N Devasena, R Vennila, G Sumathi, R Vaidyanathan1.   

Abstract

PURPOSE: The aim of the present study was to perform molecular characterisation of the blaNDM plasmids and to understand the mechanism of its spread among pathogenic bacteria.
MATERIALS AND METHODS: Seventy-six non-repetitive carbapenem-resistant isolates which were collected during Nov 2011 to April 2013 from four hospitals in Chennai were analyzed for the presence of the blaNDM gene by PCR. Further, the genetic context of the blaNDM gene was analyzed by PCR specific to ISAba125 and bleMBL gene. One of the blaNDM plasmid was completely sequenced in the Illumina HiSeq platform.
RESULTS: Twenty-three isolates consisting of 8 Escherichia coli, 8 Klebsiella pneumoniae, 3 Klebsiella oxytoca, 3 Acinetobacter baumanii and 1 Pseudomonas aeruginosa were found to carry the blaNDM gene. In 18 isolates the blaNDM gene was associated with a bleMBL gene and the ISAba125 element. The complete sequencing of pNDM-MGR194 revealed an IncX3 replication type plasmid, with a length of 46,253 bp, an average GC content of 47% and 59 putative ORFs. The iteron region contained the blaNDM5 gene and the bleMBL , trpF and dsbC genes downstream and an IS5 inserted within the ISAba125 element upstream.
CONCLUSION: This is the first report where the blaNDM gene insertion in a plasmid is not accompanied by other resistance gene determinants. These observations suggest that the IncX3 plasmid pNDM-MGR194 is an early stage in the dissemination of the blaNDM .

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Year:  2015        PMID: 25559999     DOI: 10.4103/0255-0857.148373

Source DB:  PubMed          Journal:  Indian J Med Microbiol        ISSN: 0255-0857            Impact factor:   0.985


  45 in total

1.  Genomic Characteristics of NDM-Producing Enterobacteriaceae Isolates in Australia and Their blaNDM Genetic Contexts.

Authors:  Alexander M Wailan; David L Paterson; Karina Kennedy; Paul R Ingram; Evan Bursle; Hanna E Sidjabat
Journal:  Antimicrob Agents Chemother       Date:  2015-10-19       Impact factor: 5.191

2.  Plasmid-Mediated Novel blaNDM-17 Gene Encoding a Carbapenemase with Enhanced Activity in a Sequence Type 48 Escherichia coli Strain.

Authors:  Zhihai Liu; Yang Wang; Timothy R Walsh; Dejun Liu; Zhangqi Shen; Rongmin Zhang; Wenjuan Yin; Hong Yao; Jiyun Li; Jianzhong Shen
Journal:  Antimicrob Agents Chemother       Date:  2017-04-24       Impact factor: 5.191

3.  Spread of Plasmid-Encoded NDM-1 and GES-5 Carbapenemases among Extensively Drug-Resistant and Pandrug-Resistant Clinical Enterobacteriaceae in Durban, South Africa.

Authors:  Torunn Pedersen; John Osei Sekyere; Usha Govinden; Krishnee Moodley; Audun Sivertsen; Ørjan Samuelsen; Sabiha Yusuf Essack; Arnfinn Sundsfjord
Journal:  Antimicrob Agents Chemother       Date:  2018-04-26       Impact factor: 5.191

4.  Emergence of NDM-5- and MCR-1-Producing Escherichia coli Clones ST648 and ST156 from a Single Muscovy Duck (Cairina moschata).

Authors:  Run-Shi Yang; Youjun Feng; Xiao-Yue Lv; Jia-Hong Duan; Jing Chen; Liang-Xing Fang; Jing Xia; Xiao-Ping Liao; Jian Sun; Ya-Hong Liu
Journal:  Antimicrob Agents Chemother       Date:  2016-10-21       Impact factor: 5.191

5.  Various Sequence Types of Escherichia coli Isolates Coharboring blaNDM-5 and mcr-1 Genes from a Commercial Swine Farm in China.

Authors:  Ling-Han Kong; Chang-Wei Lei; Su-Zhen Ma; Wei Jiang; Bi-Hui Liu; Yong-Xiang Wang; Ru Guan; Shuai Men; Qi-Wu Yuan; Guang-Yang Cheng; Wen-Cheng Zhou; Hong-Ning Wang
Journal:  Antimicrob Agents Chemother       Date:  2017-02-23       Impact factor: 5.191

6.  Molecular Epidemiology and Genome Dynamics of New Delhi Metallo-β-Lactamase-Producing Extraintestinal Pathogenic Escherichia coli Strains from India.

Authors:  Amit Ranjan; Sabiha Shaik; Agnismita Mondal; Nishant Nandanwar; Arif Hussain; Torsten Semmler; Narender Kumar; Sumeet K Tiwari; Savita Jadhav; Lothar H Wieler; Niyaz Ahmed
Journal:  Antimicrob Agents Chemother       Date:  2016-10-21       Impact factor: 5.191

7.  Complete Sequences of mcr-1-Harboring Plasmids from Extended-Spectrum-β-Lactamase- and Carbapenemase-Producing Enterobacteriaceae.

Authors:  Aiqing Li; Yong Yang; Minhui Miao; Kalyan D Chavda; José R Mediavilla; Xiaofang Xie; Ping Feng; Yi-Wei Tang; Barry N Kreiswirth; Liang Chen; Hong Du
Journal:  Antimicrob Agents Chemother       Date:  2016-06-20       Impact factor: 5.191

8.  Molecular Characterization by Using Next-Generation Sequencing of Plasmids Containing blaNDM-7 in Enterobacteriaceae from Calgary, Canada.

Authors:  L Chen; G Peirano; T Lynch; K D Chavda; D B Gregson; D L Church; J Conly; B N Kreiswirth; J D Pitout
Journal:  Antimicrob Agents Chemother       Date:  2015-12-07       Impact factor: 5.191

9.  Characteristics of Carbapenemase-Producing Enterobacteriaceae in Wastewater Revealed by Genomic Analysis.

Authors:  Ryota Gomi; Tomonari Matsuda; Masaki Yamamoto; Pei-Hsin Chou; Michio Tanaka; Satoshi Ichiyama; Minoru Yoneda; Yasufumi Matsumura
Journal:  Antimicrob Agents Chemother       Date:  2018-04-26       Impact factor: 5.191

10.  First Report of Klebsiella oxytoca Strain Simultaneously Producing NDM-1, IMP-4, and KPC-2 Carbapenemases.

Authors:  Juan Wang; Min Yuan; Hai Chen; Xia Chen; Yuanchun Jia; Xiong Zhu; Li Bai; Xue Bai; Séamus Fanning; Jinxing Lu; Juan Li
Journal:  Antimicrob Agents Chemother       Date:  2017-08-24       Impact factor: 5.191

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