Literature DB >> 25557930

Genetic characterization of a rare H12N3 avian influenza virus isolated from a green-winged teal in Japan.

Vuong Nghia Bui1, Haruko Ogawa, Islam T M Hussein, Nichola J Hill, Dai Quang Trinh, Mohammed AboElkhair, Serageldeen Sultan, Eric Ma, Keisuke Saito, Yukiko Watanabe, Jonathan A Runstadler, Kunitoshi Imai.   

Abstract

This study reports on the genetic characterization of an avian influenza virus, subtype H12N3, isolated from an Eurasian green-winged teal (Anas crecca) in Japan in 2009. The entire genome sequence of the isolate was analyzed, and phylogenetic analyses were conducted to characterize the evolutionary history of the isolate. Phylogenetic analysis of the hemagglutinin and neuraminidase genes indicated that the virus belonged to the Eurasian-like avian lineage. Molecular dating indicated that this H12 virus is likely a multiple reassortant influenza A virus. This is the first reported characterization of influenza A virus subtype H12N3 isolated in Japan and these data contribute to the accumulation of knowledge on the genetic diversity and generation of novel influenza A viruses.

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Year:  2015        PMID： 25557930     DOI： 10.1007/s11262-014-1162-9

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  28 in total

Review 1.  A review of avian influenza in different bird species.

Authors:  D J Alexander
Journal:  Vet Microbiol       Date:  2000-05-22       Impact factor: 3.293

2.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

Review 3.  Global patterns of influenza a virus in wild birds.

Authors:  Björn Olsen; Vincent J Munster; Anders Wallensten; Jonas Waldenström; Albert D M E Osterhaus; Ron A M Fouchier
Journal:  Science       Date:  2006-04-21       Impact factor: 47.728

4.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

Review 5.  Evolution and ecology of influenza A viruses.

Authors:  R G Webster; W J Bean; O T Gorman; T M Chambers; Y Kawaoka
Journal:  Microbiol Rev       Date:  1992-03

6.  Surveillance of avian influenza viruses in Northern pintails (Anas acuta) in Tohoku District, Japan.

Authors:  Alam Jahangir; Yuko Watanabe; Omoto Chinen; Shoki Yamazaki; Kouji Sakai; Masashi Okamura; Masayuki Nakamura; Kazuaki Takehara
Journal:  Avian Dis       Date:  2008-03       Impact factor: 1.577

7.  Duck influenza lacking evidence of disease signs and immune response.

Authors:  H Kida; R Yanagawa; Y Matsuoka
Journal:  Infect Immun       Date:  1980-11       Impact factor: 3.441

8.  Surveillance and characterization of avian influenza viruses from migratory water birds in eastern Hokkaido, the northern part of Japan, 2009-2010.

Authors:  Lary N B Abao; Dulamjav Jamsransuren; Vuong N Bui; Lai H Ngo; Dai Q Trinh; Emi Yamaguchi; Dhanasekaran Vijaykrishna; Jonathan Runstadler; Haruko Ogawa; Kunitoshi Imai
Journal:  Virus Genes       Date:  2012-12-21       Impact factor: 2.332

9.  Bayesian phylogenetics with BEAUti and the BEAST 1.7.

Authors:  Alexei J Drummond; Marc A Suchard; Dong Xie; Andrew Rambaut
Journal:  Mol Biol Evol       Date:  2012-02-25       Impact factor: 16.240

10.  Spatial, temporal, and species variation in prevalence of influenza A viruses in wild migratory birds.

Authors:  Vincent J Munster; Chantal Baas; Pascal Lexmond; Jonas Waldenström; Anders Wallensten; Thord Fransson; Guus F Rimmelzwaan; Walter E P Beyer; Martin Schutten; Björn Olsen; Albert D M E Osterhaus; Ron A M Fouchier
Journal:  PLoS Pathog       Date:  2007-05-11       Impact factor: 6.823
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  2 in total

1.  Characterization and Phylodynamics of Reassortant H12Nx Viruses in Northern Eurasia.

Authors:  Kirill Sharshov; Junki Mine; Ivan Sobolev; Olga Kurskaya; Nikita Dubovitskiy; Marsel Kabilov; Tatiana Alikina; Momoko Nakayama; Ryota Tsunekuni; Anastasiya Derko; Elena Prokopyeva; Alexander Alekseev; Michael Shchelkanov; Alexey Druzyaka; Alimurad Gadzhiev; Yuko Uchida; Alexander Shestopalov; Takehiko Saito
Journal:  Microorganisms       Date:  2019-12-03

2.  Characterization of Avian Influenza Virus H10-H12 Subtypes Isolated from Wild Birds in Shanghai, China from 2016 to 2019.

Authors:  Ling Tang; Wangjun Tang; Le Ming; Jianming Gu; Kai Qian; Xiaofang Li; Tianhou Wang; Guimei He
Journal:  Viruses       Date:  2020-09-25       Impact factor: 5.048
  2 in total

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