Literature DB >> 25553041

Crystal structure of 2,2,3,3-tetra-methyl-1,1,1,4,4,4-hexa-phenyl-tetra-germane.

Kirill V Zaitsev1, Sergey S Karlov1, Galina S Zaitseva1, Ali Alizade2, Yuri L Slovokhotov1.   

Abstract

The mol-ecule of the title compound, C40H42Ge4, lies with its central Ge-Ge bond on an inversion centre giving rise to a zigzag backbone of four tetra-hedrally coordinated Ge atoms. The symmetrically independent Ge-Ge bonds are slightly shorter than in other organo-tetra-germanes whereas the Ge-CPh (Ph = phen-yl) and Ge-CMe (Me = meth-yl) distances have their usual values. In the crystal, (010) layers of Ph6Me4Ge4 mol-ecules with a parallel orientation of the Ge4 backbone exist, held together by van der Waals forces only. Main bond lengths in organo-substituted oligogermanes are compared.

Entities:  

Keywords:  crystal structure; layered structure; organo­tetra­germane; zigzag backbone

Year:  2014        PMID: 25553041      PMCID: PMC4257417          DOI: 10.1107/S160053681402501X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

A search for ‘organic electronics’ materials in systems of conjugated CC bonds (Kobayashi et al., 2011 ▶) was recently extended to organometallic mol­ecules containing chains of atoms such as Ge, Si, or Sn (Marschner & Hlina, 2013 ▶). The established routines used to obtain oligogermanes via hydro­germolysis or the reaction of germyllithium reagents with germanium halogenides (Amadoruge & Weinert, 2008 ▶) may give rise to unexpected by-products due to side reactions. As a part of our studies of the chemistry of oligogermanium compounds (Zaitsev et al., 2012 ▶, 2013 ▶, 2014 ▶), the title compound was obtained as a by-product. For related crystal structures of organo­tetra­germanes, see: Roller et al. (1986 ▶); Dräger & Simon (1986 ▶); Wagner et al. (2009 ▶); Amadoruge et al. (2010 ▶).

Experimental

Crystal data

C40H42Ge4 M = 813.10 Monoclinic, a = 9.6402 (5) Å b = 13.6386 (6) Å c = 14.0503 (7) Å β = 104.560 (1)° V = 1787.99 (15) Å3 Z = 2 Mo Kα radiation μ = 3.36 mm−1 T = 120 K 0.55 × 0.53 × 0.11 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.391, T max = 0.701 22283 measured reflections 5210 independent reflections 4222 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.066 S = 1.05 5210 reflections 202 parameters H-atom parameters constrained Δρmax = 0.62 e Å−3 Δρmin = −0.39 e Å−3

Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681402501X/wm5086sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681402501X/wm5086Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S160053681402501X/wm5086Isup3.cml Click here for additional data file. x y z . DOI: 10.1107/S160053681402501X/wm5086fig1.tif A view of the title mol­ecule showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen atoms are omitted for clarity. [Symmetry operator (A) −x + 1, −y + 1, −z + 1.] CCDC reference: 1034201 Additional supporting information: crystallographic information; 3D view; checkCIF report
C40H42Ge4F(000) = 820
Mr = 813.10Dx = 1.510 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7722 reflections
a = 9.6402 (5) Åθ = 2.2–32.5°
b = 13.6386 (6) ŵ = 3.36 mm1
c = 14.0503 (7) ÅT = 120 K
β = 104.560 (1)°Prism, colourless
V = 1787.99 (15) Å30.55 × 0.53 × 0.11 mm
Z = 2
Bruker APEXII CCD diffractometer5210 independent reflections
Radiation source: fine-focus sealed tube4222 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.039
φ and ω scansθmax = 30.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −13→13
Tmin = 0.391, Tmax = 0.701k = −19→19
22283 measured reflectionsl = −19→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H-atom parameters constrained
wR(F2) = 0.066w = 1/[σ2(Fo2) + (0.0262P)2 + 0.6663P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
5210 reflectionsΔρmax = 0.62 e Å3
202 parametersΔρmin = −0.39 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0062 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ge10.44925 (2)0.553177 (15)0.551768 (15)0.01582 (6)
Ge20.35670 (2)0.459956 (15)0.670324 (16)0.01586 (6)
C10.5900 (3)0.65022 (16)0.61880 (17)0.0266 (5)
H1A0.63110.68370.57050.040*
H1B0.66650.61720.66750.040*
H1C0.54300.69830.65200.040*
C20.2832 (2)0.62288 (17)0.47117 (16)0.0264 (5)
H2A0.31530.66980.42840.040*
H2B0.23400.65800.51400.040*
H2C0.21710.57570.43080.040*
C30.2686 (2)0.33907 (14)0.60806 (14)0.0175 (4)
C40.1389 (2)0.34120 (15)0.53599 (16)0.0224 (4)
H4A0.08860.40140.52080.027*
C50.0824 (2)0.25622 (17)0.48630 (17)0.0264 (5)
H5A−0.00560.25880.43720.032*
C60.1544 (2)0.16757 (16)0.50815 (17)0.0256 (5)
H6A0.11550.10970.47420.031*
C70.2829 (2)0.16369 (15)0.57958 (16)0.0236 (4)
H7A0.33200.10310.59490.028*
C80.3399 (2)0.24892 (15)0.62893 (15)0.0201 (4)
H8A0.42850.24590.67750.024*
C90.5064 (2)0.42690 (14)0.78825 (15)0.0170 (4)
C100.4757 (2)0.41586 (16)0.87949 (16)0.0227 (4)
H10A0.37980.42340.88440.027*
C110.5827 (3)0.39404 (16)0.96343 (16)0.0255 (5)
H11A0.55930.38611.02470.031*
C120.7234 (2)0.38385 (15)0.95799 (16)0.0249 (5)
H12A0.79680.37011.01550.030*
C130.7560 (2)0.39384 (16)0.86836 (16)0.0244 (5)
H13A0.85210.38590.86410.029*
C140.6489 (2)0.41554 (15)0.78413 (16)0.0204 (4)
H14A0.67300.42270.72300.024*
C150.2120 (2)0.53782 (15)0.71306 (15)0.0182 (4)
C160.2365 (2)0.63689 (15)0.73511 (16)0.0222 (4)
H16A0.32240.66640.72760.027*
C170.1380 (2)0.69347 (16)0.76790 (16)0.0245 (5)
H17A0.15770.76060.78350.029*
C180.0110 (2)0.65232 (17)0.77794 (16)0.0259 (5)
H18A−0.05740.69110.79920.031*
C19−0.0148 (3)0.55397 (17)0.7565 (2)0.0317 (5)
H19A−0.10110.52500.76390.038*
C200.0841 (2)0.49707 (16)0.72433 (18)0.0266 (5)
H20A0.06450.42970.70980.032*
U11U22U33U12U13U23
Ge10.01786 (11)0.01507 (10)0.01456 (11)0.00087 (7)0.00413 (8)0.00019 (8)
Ge20.01524 (11)0.01695 (11)0.01510 (11)−0.00037 (8)0.00329 (8)0.00050 (8)
C10.0321 (13)0.0246 (11)0.0233 (11)−0.0078 (9)0.0076 (9)−0.0030 (9)
C20.0299 (12)0.0282 (11)0.0200 (11)0.0107 (9)0.0043 (9)0.0031 (9)
C30.0166 (10)0.0214 (10)0.0148 (9)−0.0012 (7)0.0046 (8)0.0004 (7)
C40.0214 (11)0.0225 (10)0.0217 (11)0.0004 (8)0.0022 (8)0.0021 (8)
C50.0223 (11)0.0319 (12)0.0225 (11)−0.0049 (9)0.0011 (9)−0.0019 (9)
C60.0258 (12)0.0261 (11)0.0259 (12)−0.0071 (9)0.0084 (9)−0.0065 (9)
C70.0257 (11)0.0202 (10)0.0261 (12)0.0005 (8)0.0086 (9)0.0013 (8)
C80.0188 (10)0.0232 (10)0.0182 (10)−0.0003 (8)0.0045 (8)0.0028 (8)
C90.0187 (10)0.0144 (9)0.0169 (10)−0.0015 (7)0.0027 (8)0.0004 (7)
C100.0221 (11)0.0240 (10)0.0226 (11)−0.0007 (8)0.0068 (9)0.0019 (8)
C110.0320 (12)0.0276 (11)0.0166 (10)0.0007 (9)0.0056 (9)0.0048 (8)
C120.0293 (12)0.0216 (10)0.0198 (11)0.0020 (8)−0.0011 (9)0.0023 (8)
C130.0209 (11)0.0254 (11)0.0258 (12)0.0037 (8)0.0035 (9)0.0027 (9)
C140.0203 (10)0.0236 (10)0.0179 (10)0.0026 (8)0.0060 (8)0.0011 (8)
C150.0172 (9)0.0225 (10)0.0146 (9)0.0008 (8)0.0031 (7)0.0026 (8)
C160.0193 (10)0.0243 (10)0.0227 (11)−0.0040 (8)0.0051 (8)−0.0038 (8)
C170.0266 (12)0.0243 (10)0.0219 (11)0.0004 (9)0.0048 (9)−0.0047 (8)
C180.0255 (12)0.0315 (12)0.0225 (11)0.0071 (9)0.0096 (9)0.0010 (9)
C190.0214 (11)0.0352 (13)0.0427 (15)−0.0027 (9)0.0162 (10)0.0027 (11)
C200.0243 (12)0.0235 (11)0.0345 (13)−0.0027 (9)0.0117 (10)0.0006 (9)
Ge1—C21.959 (2)C8—H8A0.9500
Ge1—C11.959 (2)C9—C101.394 (3)
Ge1—Ge1i2.4276 (4)C9—C141.398 (3)
Ge1—Ge22.4361 (3)C10—C111.390 (3)
Ge2—C91.957 (2)C10—H10A0.9500
Ge2—C31.957 (2)C11—C121.384 (3)
Ge2—C151.963 (2)C11—H11A0.9500
C1—H1A0.9800C12—C131.379 (3)
C1—H1B0.9800C12—H12A0.9500
C1—H1C0.9800C13—C141.393 (3)
C2—H2A0.9800C13—H13A0.9500
C2—H2B0.9800C14—H14A0.9500
C2—H2C0.9800C15—C161.393 (3)
C3—C41.398 (3)C15—C201.397 (3)
C3—C81.403 (3)C16—C171.390 (3)
C4—C51.391 (3)C16—H16A0.9500
C4—H4A0.9500C17—C181.386 (3)
C5—C61.389 (3)C17—H17A0.9500
C5—H5A0.9500C18—C191.383 (3)
C6—C71.386 (3)C18—H18A0.9500
C6—H6A0.9500C19—C201.391 (3)
C7—C81.394 (3)C19—H19A0.9500
C7—H7A0.9500C20—H20A0.9500
C2—Ge1—C1108.47 (10)C7—C8—C3121.03 (19)
C2—Ge1—Ge1i109.73 (7)C7—C8—H8A119.5
C1—Ge1—Ge1i110.91 (7)C3—C8—H8A119.5
C2—Ge1—Ge2105.19 (7)C10—C9—C14117.63 (19)
C1—Ge1—Ge2110.63 (7)C10—C9—Ge2121.46 (16)
Ge1i—Ge1—Ge2111.715 (14)C14—C9—Ge2120.90 (15)
C9—Ge2—C3109.21 (8)C11—C10—C9121.3 (2)
C9—Ge2—C15107.16 (9)C11—C10—H10A119.3
C3—Ge2—C15109.31 (8)C9—C10—H10A119.3
C9—Ge2—Ge1112.36 (6)C12—C11—C10120.2 (2)
C3—Ge2—Ge1109.04 (6)C12—C11—H11A119.9
C15—Ge2—Ge1109.71 (6)C10—C11—H11A119.9
Ge1—C1—H1A109.5C13—C12—C11119.5 (2)
Ge1—C1—H1B109.5C13—C12—H12A120.3
H1A—C1—H1B109.5C11—C12—H12A120.3
Ge1—C1—H1C109.5C12—C13—C14120.4 (2)
H1A—C1—H1C109.5C12—C13—H13A119.8
H1B—C1—H1C109.5C14—C13—H13A119.8
Ge1—C2—H2A109.5C13—C14—C9121.0 (2)
Ge1—C2—H2B109.5C13—C14—H14A119.5
H2A—C2—H2B109.5C9—C14—H14A119.5
Ge1—C2—H2C109.5C16—C15—C20117.75 (19)
H2A—C2—H2C109.5C16—C15—Ge2119.92 (15)
H2B—C2—H2C109.5C20—C15—Ge2122.31 (16)
C4—C3—C8118.14 (19)C17—C16—C15121.4 (2)
C4—C3—Ge2120.99 (15)C17—C16—H16A119.3
C8—C3—Ge2120.67 (15)C15—C16—H16A119.3
C5—C4—C3120.8 (2)C18—C17—C16120.3 (2)
C5—C4—H4A119.6C18—C17—H17A119.9
C3—C4—H4A119.6C16—C17—H17A119.9
C6—C5—C4120.2 (2)C19—C18—C17119.1 (2)
C6—C5—H5A119.9C19—C18—H18A120.5
C4—C5—H5A119.9C17—C18—H18A120.5
C7—C6—C5119.9 (2)C18—C19—C20120.7 (2)
C7—C6—H6A120.0C18—C19—H19A119.6
C5—C6—H6A120.0C20—C19—H19A119.6
C6—C7—C8119.9 (2)C19—C20—C15120.8 (2)
C6—C7—H7A120.1C19—C20—H20A119.6
C8—C7—H7A120.1C15—C20—H20A119.6
Table 1

Main bond lengths () in organo-substituted oligogermanes

Me is CH3, Ms is Me3Si and Tol is p-C6H4Me.

CompoundGeGeperiph GeGecentral GeCPh GeCMe
Ph3GeMe2GeGeMe2GePh3 a 2.4361(3)2.4276(4)1.9611.965
Ms3GeMe2GeGeMe2GeMs3 b 2.4412.442 1.967
Tol3GeGePh2GePh2GeTol3 c 2.4432.4571.973 
Ph3GeGePh2GePh2GePh3 d 2.4642.4611.969 
Ph3GeGeMe2GePh3 e 2.429 1.9571.944

References: (a) This work; (b) Wagner et al. (2009 ▶); (c) Amadoruge et al. (2010 ▶); (d) Roller et al. (1986 ▶); (e) Drger Simon (1986 ▶).

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