Literature DB >> 25553011

Crystal structure of catena-poly[[(3-tert-butyl-pyridine-κN)(4-tert-butyl-pyridine-κN)cadmium]-di-μ-thio-cyanato-κ(2) N:S;κ(2) S:N].

Julia Werner1, Thorben Reinert2, Inke Jess1, Christian Näther1.   

Abstract

In the crystal structure of the title compound, [Cd(NCS)2(C9H13N)2] n , the Cd(II) cations are coordinated in a slightly distorted octa-hedral geometry by one 3-tert-butyl-pyridine ligand, one 4-tert-butyl-pyridine ligand and two pairs of translationally-equivalent μ-1,3-bridging thio-cyanate ligands, all of which are in general positions. These μ-1,3-bridging thio-cyante anions bridge the Cd(II) cations, forming chains that propagate parallel to the b axis.

Entities:  

Keywords:  cadmium coordination polymer; crystal structure; μ-1,3-thio­cyanate anions

Year:  2014        PMID: 25553011      PMCID: PMC4257453          DOI: 10.1107/S1600536814024647

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related crystal structures with μ-1,3-bridging thio­cyanate anions, see: Banerjee et al. (2005 ▶); Reinert et al. (2012a ▶,b ▶); Tahli et al. (2011 ▶).

Experimental

Crystal data

[Cd(NCS)2(C9H13N)2] M = 498.97 Monoclinic, a = 20.0917 (8) Å b = 5.9503 (2) Å c = 21.0198 (9) Å β = 115.902 (3)° V = 2260.51 (15) Å3 Z = 4 Mo Kα radiation μ = 1.16 mm−1 T = 293 K 0.16 × 0.12 × 0.09 mm

Data collection

STOE IPDS-2 diffractometer Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008 ▶) T min = 0.760, T max = 0.895 25365 measured reflections 5407 independent reflections 4159 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.084 S = 1.14 5407 reflections 244 parameters H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.50 e Å−3

Data collection: X-AREA (Stoe & Cie, 2008 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 2011 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814024647/pk2535sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814024647/pk2535Isup2.hkl Click here for additional data file. . DOI: 10.1107/S1600536814024647/pk2535fig1.tif Crystal structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level. Symmetry code: i: (x, y+1, z); ii: (x, y-1, z). CCDC reference: 1033510 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Cd(NCS)2(C9H13N)2]F(000) = 1016
Mr = 498.97Dx = 1.466 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25365 reflections
a = 20.0917 (8) Åθ = 2.0–28.0°
b = 5.9503 (2) ŵ = 1.16 mm1
c = 21.0198 (9) ÅT = 293 K
β = 115.902 (3)°Block, colourless
V = 2260.51 (15) Å30.16 × 0.12 × 0.09 mm
Z = 4
STOE IPDS-2 diffractometer5407 independent reflections
Radiation source: fine-focus sealed tube4159 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.044
ω scansθmax = 28.0°, θmin = 2.0°
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008)h = −26→26
Tmin = 0.760, Tmax = 0.895k = −7→7
25365 measured reflectionsl = −27→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.084H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0326P)2 + 0.8678P] where P = (Fo2 + 2Fc2)/3
5407 reflections(Δ/σ)max = 0.001
244 parametersΔρmax = 0.41 e Å3
0 restraintsΔρmin = −0.50 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.732991 (14)0.24172 (4)0.269228 (13)0.04067 (8)
N10.67220 (19)0.5638 (5)0.20986 (17)0.0535 (7)
C10.65872 (17)0.7440 (6)0.18809 (16)0.0415 (6)
S10.63714 (5)0.99805 (14)0.15449 (5)0.0484 (2)
N20.79392 (17)−0.0756 (5)0.32949 (17)0.0514 (7)
C20.80555 (17)−0.2557 (6)0.35212 (16)0.0421 (6)
S20.82427 (6)−0.51157 (15)0.38460 (5)0.0554 (2)
N110.81232 (17)0.2863 (5)0.21360 (15)0.0482 (7)
C110.8505 (3)0.4716 (7)0.2206 (2)0.0724 (13)
H110.84730.58350.25010.087*
C120.8948 (3)0.5105 (7)0.1870 (2)0.0713 (13)
H120.92090.64490.19500.086*
C130.9014 (2)0.3547 (6)0.14183 (19)0.0443 (7)
C140.8606 (2)0.1617 (7)0.1342 (3)0.0638 (11)
H140.86220.04740.10470.077*
C150.8174 (2)0.1363 (7)0.1698 (2)0.0638 (11)
H150.79010.00470.16230.077*
C160.9479 (2)0.3988 (7)0.1019 (2)0.0509 (8)
C170.9747 (3)0.1778 (9)0.0830 (3)0.0847 (15)
H17A1.00380.21050.05800.127*
H17B0.93280.08820.05360.127*
H17C1.00430.09670.12550.127*
C180.8990 (3)0.5207 (10)0.0334 (3)0.0867 (16)
H18A0.92690.55080.00720.130*
H18B0.88210.65980.04440.130*
H18C0.85710.42820.00560.130*
C191.0150 (3)0.5424 (10)0.1453 (3)0.0862 (16)
H19A1.04320.56740.11910.129*
H19B1.04520.46640.18880.129*
H19C0.99900.68400.15570.129*
N210.64660 (16)0.2045 (5)0.31532 (16)0.0470 (7)
C210.5826 (2)0.3142 (7)0.2852 (2)0.0546 (9)
H210.57330.40390.24590.066*
C220.5296 (2)0.2999 (7)0.3098 (2)0.0629 (11)
H220.48550.37950.28790.076*
C230.5429 (2)0.1660 (7)0.3673 (2)0.0573 (10)
H230.50750.15540.38460.069*
C240.60838 (19)0.0467 (6)0.39999 (18)0.0454 (8)
C250.6582 (2)0.0755 (6)0.37141 (19)0.0473 (8)
H250.7030−0.00050.39280.057*
C260.6255 (2)−0.0980 (7)0.4648 (2)0.0587 (10)
C270.6837 (4)−0.2738 (12)0.4745 (4)0.133 (3)
H27A0.6662−0.37060.43390.200*
H27B0.6933−0.36110.51600.200*
H27C0.7285−0.20110.47970.200*
C280.6512 (6)0.0518 (13)0.5280 (3)0.171 (4)
H28A0.6627−0.03730.56960.257*
H28B0.61270.15690.52230.257*
H28C0.69450.13190.53270.257*
C290.5577 (3)−0.2282 (11)0.4579 (4)0.1055 (19)
H29A0.5416−0.32550.41750.158*
H29B0.5188−0.12490.45210.158*
H29C0.5699−0.31650.49970.158*
U11U22U33U12U13U23
Cd10.04773 (12)0.03305 (11)0.04745 (12)0.00141 (12)0.02654 (10)0.00495 (11)
N10.064 (2)0.0352 (15)0.0566 (18)0.0003 (14)0.0216 (16)0.0037 (14)
C10.0434 (15)0.0405 (15)0.0407 (15)−0.0062 (17)0.0185 (13)−0.0032 (17)
S10.0550 (5)0.0374 (4)0.0470 (5)0.0007 (4)0.0167 (4)0.0063 (4)
N20.0536 (18)0.0355 (14)0.0603 (19)0.0036 (13)0.0204 (15)0.0053 (14)
C20.0422 (15)0.0421 (16)0.0425 (15)−0.0014 (17)0.0190 (13)−0.0044 (17)
S20.0675 (6)0.0385 (4)0.0481 (5)−0.0007 (4)0.0141 (5)0.0058 (4)
N110.0579 (17)0.0447 (16)0.0456 (15)−0.0034 (14)0.0260 (14)−0.0023 (13)
C110.108 (4)0.055 (2)0.084 (3)−0.028 (2)0.070 (3)−0.024 (2)
C120.097 (3)0.057 (2)0.086 (3)−0.032 (2)0.065 (3)−0.021 (2)
C130.0418 (18)0.0475 (18)0.0463 (19)0.0013 (15)0.0218 (16)0.0042 (15)
C140.069 (3)0.055 (2)0.090 (3)−0.017 (2)0.055 (3)−0.023 (2)
C150.063 (2)0.052 (2)0.088 (3)−0.017 (2)0.044 (2)−0.011 (2)
C160.048 (2)0.059 (2)0.053 (2)0.0025 (17)0.0279 (17)0.0068 (17)
C170.087 (3)0.081 (3)0.115 (4)0.013 (3)0.071 (3)0.004 (3)
C180.082 (3)0.117 (4)0.074 (3)0.019 (3)0.047 (3)0.038 (3)
C190.064 (3)0.111 (4)0.097 (4)−0.026 (3)0.047 (3)−0.013 (3)
N210.0460 (15)0.0488 (17)0.0530 (16)0.0030 (13)0.0278 (14)0.0065 (13)
C210.052 (2)0.060 (2)0.054 (2)0.0076 (17)0.0246 (18)0.0103 (17)
C220.046 (2)0.074 (3)0.071 (3)0.0149 (19)0.0288 (19)0.013 (2)
C230.048 (2)0.075 (2)0.058 (2)−0.0019 (19)0.0309 (19)−0.0028 (19)
C240.0450 (18)0.055 (2)0.0395 (17)−0.0068 (16)0.0220 (15)−0.0049 (15)
C250.0436 (18)0.054 (2)0.0477 (19)0.0038 (16)0.0230 (16)0.0046 (16)
C260.063 (2)0.071 (3)0.049 (2)−0.007 (2)0.0303 (19)0.0052 (19)
C270.118 (5)0.159 (7)0.151 (6)0.059 (5)0.084 (5)0.103 (5)
C280.323 (12)0.124 (6)0.047 (3)−0.086 (7)0.063 (5)−0.013 (3)
C290.094 (4)0.110 (5)0.124 (5)−0.012 (4)0.058 (4)0.038 (4)
Cd1—N22.305 (3)C18—H18A0.9600
Cd1—N12.322 (3)C18—H18B0.9600
Cd1—N212.339 (3)C18—H18C0.9600
Cd1—N112.368 (3)C19—H19A0.9600
Cd1—S2i2.7412 (10)C19—H19B0.9600
Cd1—S1ii2.7513 (10)C19—H19C0.9600
N1—C11.151 (4)N21—C211.330 (5)
C1—S11.644 (4)N21—C251.339 (4)
S1—Cd1i2.7513 (10)C21—C221.375 (5)
N2—C21.154 (4)C21—H210.9300
C2—S21.644 (4)C22—C231.374 (6)
S2—Cd1ii2.7412 (10)C22—H220.9300
N11—C111.314 (5)C23—C241.385 (5)
N11—C151.319 (5)C23—H230.9300
C11—C121.378 (5)C24—C251.384 (4)
C11—H110.9300C24—C261.518 (5)
C12—C131.373 (5)C25—H250.9300
C12—H120.9300C26—C281.492 (7)
C13—C141.379 (5)C26—C271.514 (7)
C13—C161.527 (5)C26—C291.518 (6)
C14—C151.379 (5)C27—H27A0.9600
C14—H140.9300C27—H27B0.9600
C15—H150.9300C27—H27C0.9600
C16—C191.519 (6)C28—H28A0.9600
C16—C181.525 (6)C28—H28B0.9600
C16—C171.537 (6)C28—H28C0.9600
C17—H17A0.9600C29—H29A0.9600
C17—H17B0.9600C29—H29B0.9600
C17—H17C0.9600C29—H29C0.9600
N2—Cd1—N1179.28 (11)H18A—C18—H18B109.5
N2—Cd1—N2190.40 (11)C16—C18—H18C109.5
N1—Cd1—N2189.39 (11)H18A—C18—H18C109.5
N2—Cd1—N1193.03 (11)H18B—C18—H18C109.5
N1—Cd1—N1187.23 (11)C16—C19—H19A109.5
N21—Cd1—N11175.34 (11)C16—C19—H19B109.5
N2—Cd1—S2i87.88 (8)H19A—C19—H19B109.5
N1—Cd1—S2i91.43 (8)C16—C19—H19C109.5
N21—Cd1—S2i90.86 (8)H19A—C19—H19C109.5
N11—Cd1—S2i92.42 (8)H19B—C19—H19C109.5
N2—Cd1—S1ii92.89 (8)C21—N21—C25117.4 (3)
N1—Cd1—S1ii87.79 (8)C21—N21—Cd1119.6 (2)
N21—Cd1—S1ii87.21 (8)C25—N21—Cd1123.0 (2)
N11—Cd1—S1ii89.46 (8)N21—C21—C22122.5 (4)
S2i—Cd1—S1ii177.92 (3)N21—C21—H21118.8
C1—N1—Cd1163.7 (3)C22—C21—H21118.8
N1—C1—S1178.0 (3)C23—C22—C21118.8 (4)
C1—S1—Cd1i98.96 (11)C23—C22—H22120.6
C2—N2—Cd1161.9 (3)C21—C22—H22120.6
N2—C2—S2178.6 (3)C22—C23—C24120.7 (3)
C2—S2—Cd1ii100.68 (11)C22—C23—H23119.6
C11—N11—C15115.2 (3)C24—C23—H23119.6
C11—N11—Cd1121.6 (2)C25—C24—C23115.6 (3)
C15—N11—Cd1122.9 (2)C25—C24—C26122.4 (3)
N11—C11—C12124.1 (4)C23—C24—C26122.0 (3)
N11—C11—H11118.0N21—C25—C24124.9 (3)
C12—C11—H11118.0N21—C25—H25117.5
C13—C12—C11121.3 (4)C24—C25—H25117.5
C13—C12—H12119.3C28—C26—C27110.3 (6)
C11—C12—H12119.3C28—C26—C24108.3 (4)
C12—C13—C14114.3 (3)C27—C26—C24111.8 (3)
C12—C13—C16122.0 (3)C28—C26—C29109.6 (5)
C14—C13—C16123.6 (3)C27—C26—C29105.6 (5)
C13—C14—C15120.7 (4)C24—C26—C29111.2 (4)
C13—C14—H14119.6C26—C27—H27A109.5
C15—C14—H14119.6C26—C27—H27B109.5
N11—C15—C14124.3 (4)H27A—C27—H27B109.5
N11—C15—H15117.8C26—C27—H27C109.5
C14—C15—H15117.8H27A—C27—H27C109.5
C19—C16—C18109.7 (4)H27B—C27—H27C109.5
C19—C16—C13111.2 (3)C26—C28—H28A109.5
C18—C16—C13107.7 (3)C26—C28—H28B109.5
C19—C16—C17108.5 (4)H28A—C28—H28B109.5
C18—C16—C17108.5 (4)C26—C28—H28C109.5
C13—C16—C17111.3 (3)H28A—C28—H28C109.5
C16—C17—H17A109.5H28B—C28—H28C109.5
C16—C17—H17B109.5C26—C29—H29A109.5
H17A—C17—H17B109.5C26—C29—H29B109.5
C16—C17—H17C109.5H29A—C29—H29B109.5
H17A—C17—H17C109.5C26—C29—H29C109.5
H17B—C17—H17C109.5H29A—C29—H29C109.5
C16—C18—H18A109.5H29B—C29—H29C109.5
C16—C18—H18B109.5
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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Bis-(3-tert-butyl-pyridine-κN)bis-(4-tert-butyl-pyridine-κN)bis(thio-cyanato-κN)cadmium.

Authors:  Thorben Reinert; Inke Jess; Christian Näther
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-20

3.  Trans-bis-(3-tert-butyl-pyridine-κN)bis-(4-tert-butyl-pyridine-κN)bis-(thio-cyanato-κN)manganese(II).

Authors:  Thorben Reinert; Inke Jess; Christian Näther
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-06
  3 in total

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