Literature DB >> 25553007

Crystal structure of bis-[1-(4-bromo-benz-yl)pyridinium] bis-(1,2-di-cyano-ethene-1,2-di-thiol-ato-κ(2) S,S')nickelate(II).

Dong Zeng1, Shui-Bin Yang1, Zheng-Fang Tian1.   

Abstract

The asymmetric unit of the title salt, (C12H11BrN)2[Ni(C4N2S2)2], consists of one 1-(4-bromo-benz-yl)pyridinium cation and one half of a complex [Ni(mnt)2](2-) (mnt(2-) is the maleo-nitrile-dithiol-ate dianion). The Ni(2+) ion is located on an inversion centre and is coordinated by four S atoms from two mnt(2-) ligands, exhibiting a square-planar coordination environment. In the cation, the planes of the pyridinium and benzene rings make a dihedral angle of 69.86 (19)°. The cations and anions are alternately arranged in layers parallel to (001) and are held together by non-classical C-H⋯N hydrogen bonds.

Entities:  

Keywords:  1-(4-bromo­benz­yl)pyridinium cation; Ni2+ ion; crystal structure; hydrogen bonding; maleo­nitrile­dithiol­ate dianion; square-planar bis-1,2-di­thiol­ate complex

Year:  2014        PMID: 25553007      PMCID: PMC4257415          DOI: 10.1107/S1600536814024222

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to square-planar bis-1,2-di­thiol­ate complexes of transition metals showing potential application as magnetic materials and conductors besides others, see: Duan et al. (2010 ▶); Pei et al. (2011 ▶); Ren et al. (2002 ▶). For the structure of a closely related compound, see: Zhang et al. (2011 ▶). For synthetic aspects, see: Davison & Holm (1967 ▶).

Experimental

Crystal data

(C12H11BrN)2[Ni(C4N2S2)2] M = 837.29 Monoclinic, a = 9.783 (2) Å b = 11.962 (3) Å c = 14.858 (3) Å β = 97.385 (7)° V = 1724.3 (6) Å3 Z = 2 Mo Kα radiation μ = 3.16 mm−1 T = 296 K 0.20 × 0.15 × 0.15 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.571, T max = 0.649 14683 measured reflections 3040 independent reflections 2204 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.102 S = 1.03 3040 reflections 205 parameters H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.91 e Å−3

Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, 111. DOI: 10.1107/S1600536814024222/wm5078sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814024222/wm5078Isup2.hkl Click here for additional data file. x y z . DOI: 10.1107/S1600536814024222/wm5078fig1.tif The mol­ecular components of the title structure. Displacement ellipsoids are drawn at the 30% probability level. [Symmetry code: (A) = 1 − x, 1 − y, −z).] Click here for additional data file. . DOI: 10.1107/S1600536814024222/wm5078fig2.tif Packing diagram of the title structure viewed along [100]. The origin is at the upper right corner of the unit cell. CCDC reference: 1032163 Additional supporting information: crystallographic information; 3D view; checkCIF report
(C12H11BrN)2[Ni(C4N2S2)2]F(000) = 836
Mr = 837.29Dx = 1.613 Mg m3
Monoclinic, P21/nMelting point: 473 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 9.783 (2) ÅCell parameters from 14683 reflections
b = 11.962 (3) Åθ = 2.2–25.0°
c = 14.858 (3) ŵ = 3.16 mm1
β = 97.385 (7)°T = 296 K
V = 1724.3 (6) Å3Block, red
Z = 20.20 × 0.15 × 0.15 mm
Bruker SMART CCD diffractometer3040 independent reflections
Radiation source: fine-focus sealed tube2204 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.061
phi and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −11→11
Tmin = 0.571, Tmax = 0.649k = −14→14
14683 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.102H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0517P)2 + 0.2393P] where P = (Fo2 + 2Fc2)/3
3040 reflections(Δ/σ)max < 0.001
205 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −0.91 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.50000.50000.00000.03497 (19)
Br1−0.05497 (5)0.44064 (4)0.19128 (4)0.0857 (2)
S10.68740 (9)0.59888 (8)0.02861 (6)0.0445 (3)
S20.37034 (9)0.64490 (8)0.01000 (7)0.0479 (3)
C30.4306 (4)0.8595 (3)0.0544 (3)0.0472 (9)
N20.3771 (4)0.9425 (3)0.0661 (3)0.0651 (10)
C80.1115 (3)0.8032 (3)0.2369 (3)0.0438 (9)
C10.6257 (3)0.7321 (3)0.0478 (2)0.0398 (8)
N30.0716 (3)1.0079 (2)0.2122 (2)0.0426 (7)
C110.1688 (4)0.9204 (3)0.2526 (3)0.0532 (10)
H11A0.18940.93350.31730.064*
H11B0.25440.92630.22640.064*
C90.0500 (4)0.7490 (3)0.3036 (3)0.0563 (11)
H90.04170.78550.35790.068*
C50.0120 (4)0.5898 (3)0.2097 (3)0.0537 (11)
C100.0009 (4)0.6417 (4)0.2903 (3)0.0620 (11)
H10−0.03920.60510.33550.074*
C20.4878 (3)0.7516 (3)0.0400 (2)0.0401 (8)
C14−0.1102 (5)1.1646 (3)0.1387 (3)0.0698 (13)
H14−0.17261.21810.11320.084*
C40.7257 (4)0.8173 (3)0.0722 (3)0.0501 (9)
C150.0006 (5)1.1360 (4)0.0964 (3)0.0710 (13)
H150.01421.17020.04200.085*
C160.0911 (4)1.0574 (3)0.1337 (3)0.0586 (11)
H160.16661.03800.10490.070*
C12−0.0375 (4)1.0353 (3)0.2544 (3)0.0546 (10)
H12−0.05030.99980.30840.066*
C60.0723 (4)0.6405 (3)0.1425 (3)0.0622 (11)
H60.07940.60360.08810.075*
N10.8110 (4)0.8818 (3)0.0910 (3)0.0770 (11)
C13−0.1290 (4)1.1141 (4)0.2192 (3)0.0632 (12)
H13−0.20341.13350.24910.076*
C70.1227 (4)0.7476 (3)0.1569 (3)0.0566 (11)
H70.16490.78280.11200.068*
U11U22U33U12U13U23
Ni10.0332 (3)0.0344 (4)0.0365 (4)0.0045 (3)0.0013 (3)−0.0016 (3)
Br10.0699 (4)0.0431 (3)0.1335 (5)−0.0074 (2)−0.0270 (3)−0.0002 (3)
S10.0350 (5)0.0405 (5)0.0563 (6)0.0044 (4)−0.0003 (4)−0.0029 (5)
S20.0349 (5)0.0382 (5)0.0699 (7)0.0047 (4)0.0047 (5)−0.0076 (5)
C30.040 (2)0.044 (2)0.057 (2)−0.0019 (18)0.0059 (18)−0.004 (2)
N20.063 (2)0.048 (2)0.086 (3)0.0080 (18)0.013 (2)−0.010 (2)
C80.037 (2)0.040 (2)0.052 (2)0.0020 (16)−0.0039 (17)0.000 (2)
C10.041 (2)0.038 (2)0.039 (2)−0.0011 (16)0.0011 (16)−0.0029 (16)
N30.0439 (18)0.0342 (17)0.0487 (18)−0.0015 (14)0.0017 (14)−0.0087 (16)
C110.048 (2)0.047 (2)0.061 (3)−0.0023 (18)−0.0080 (19)−0.002 (2)
C90.069 (3)0.049 (3)0.048 (2)−0.002 (2)−0.001 (2)−0.002 (2)
C50.038 (2)0.039 (2)0.079 (3)0.0039 (17)−0.014 (2)0.005 (2)
C100.069 (3)0.053 (3)0.063 (3)−0.004 (2)0.005 (2)0.014 (2)
C20.043 (2)0.038 (2)0.0396 (19)0.0048 (16)0.0044 (15)−0.0023 (17)
C140.071 (3)0.039 (2)0.092 (4)0.010 (2)−0.020 (3)−0.003 (3)
C40.047 (2)0.045 (2)0.056 (2)0.004 (2)0.0011 (19)−0.005 (2)
C150.086 (3)0.053 (3)0.075 (3)0.009 (3)0.010 (3)0.013 (2)
C160.066 (3)0.049 (3)0.065 (3)−0.003 (2)0.025 (2)0.005 (2)
C120.054 (3)0.061 (3)0.048 (2)−0.003 (2)0.005 (2)−0.009 (2)
C60.063 (3)0.055 (3)0.069 (3)−0.003 (2)0.012 (2)−0.017 (2)
N10.059 (2)0.064 (3)0.103 (3)−0.011 (2)−0.011 (2)−0.016 (2)
C130.052 (3)0.062 (3)0.074 (3)0.009 (2)0.002 (2)−0.020 (3)
C70.056 (2)0.050 (3)0.065 (3)−0.005 (2)0.016 (2)−0.004 (2)
Ni1—S2i2.1642 (9)C9—C101.376 (5)
Ni1—S22.1642 (9)C9—H90.9300
Ni1—S12.1773 (9)C5—C101.366 (6)
Ni1—S1i2.1773 (9)C5—C61.366 (6)
Br1—C51.908 (4)C10—H100.9300
S1—C11.740 (3)C14—C151.366 (6)
S2—C21.737 (3)C14—C131.373 (6)
C3—N21.146 (4)C14—H140.9300
C3—C21.433 (5)C4—N11.144 (5)
C8—C71.379 (5)C15—C161.360 (6)
C8—C91.385 (5)C15—H150.9300
C8—C111.517 (5)C16—H160.9300
C1—C21.360 (5)C12—C131.358 (6)
C1—C41.427 (5)C12—H120.9300
N3—C161.343 (5)C6—C71.379 (5)
N3—C121.346 (5)C6—H60.9300
N3—C111.487 (4)C13—H130.9300
C11—H11A0.9700C7—H70.9300
C11—H11B0.9700
S2i—Ni1—S2180.00 (5)C6—C5—Br1118.9 (3)
S2i—Ni1—S187.84 (4)C5—C10—C9119.0 (4)
S2—Ni1—S192.16 (4)C5—C10—H10120.5
S2i—Ni1—S1i92.16 (4)C9—C10—H10120.5
S2—Ni1—S1i87.84 (4)C1—C2—C3123.0 (3)
S1—Ni1—S1i180.0C1—C2—S2120.8 (3)
C1—S1—Ni1103.21 (11)C3—C2—S2116.2 (3)
C2—S2—Ni1103.42 (12)C15—C14—C13119.6 (4)
N2—C3—C2175.7 (4)C15—C14—H14120.2
C7—C8—C9118.7 (4)C13—C14—H14120.2
C7—C8—C11120.7 (3)N1—C4—C1176.5 (4)
C9—C8—C11120.6 (3)C16—C15—C14119.9 (4)
C2—C1—C4122.6 (3)C16—C15—H15120.0
C2—C1—S1120.3 (3)C14—C15—H15120.0
C4—C1—S1117.1 (2)N3—C16—C15120.2 (4)
C16—N3—C12120.4 (3)N3—C16—H16119.9
C16—N3—C11120.4 (3)C15—C16—H16119.9
C12—N3—C11119.2 (3)N3—C12—C13120.9 (4)
N3—C11—C8112.6 (3)N3—C12—H12119.6
N3—C11—H11A109.1C13—C12—H12119.6
C8—C11—H11A109.1C5—C6—C7118.5 (4)
N3—C11—H11B109.1C5—C6—H6120.7
C8—C11—H11B109.1C7—C6—H6120.7
H11A—C11—H11B107.8C12—C13—C14119.0 (4)
C10—C9—C8120.7 (4)C12—C13—H13120.5
C10—C9—H9119.7C14—C13—H13120.5
C8—C9—H9119.7C8—C7—C6121.1 (4)
C10—C5—C6122.0 (4)C8—C7—H7119.4
C10—C5—Br1119.1 (3)C6—C7—H7119.4
D—H···AD—HH···AD···AD—H···A
C16—H16···N20.932.493.384 (6)162
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C16H16N20.932.493.384(6)162
  4 in total

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Authors:  Xiaoming Ren; Qingjin Meng; You Song; Chuanjiang Hu; Changsheng Lu; Xiaoyuan Chen; Ziling Xue
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2.  A short history of SHELX.

Authors:  George M Sheldrick
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3.  Stack pattern of the countercation-modulating magnetic property of low-dimensional [Pt(mnt)₂]⁻ monoanion spin systems.

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4.  Bis[1-(4-cyano-benz-yl)pyrazinium] bis-(1,2-dicyano-ethene-1,2-dithiol-ato)nickelate(II).

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  4 in total

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