Ran Lin1, Pengcheng Zhang, Andrew G Cheetham, Jeremy Walston, Peter Abadir, Honggang Cui. 1. Department of Chemical and Biomolecular Engineering, ‡Institute for NanoBioTechnology, §Division of Geriatrics Medicine and Gerontology, and ⊥Department of Oncology and Sidney Kimmel Comprehensive Cancer Center, The Johns Hopkins University , Baltimore, Maryland 21218, United States.
Abstract
Mitochondria are critical regulators of cellular function and survival. Delivery of therapeutic and diagnostic agents into mitochondria is a challenging task in modern pharmacology because the molecule to be delivered needs to first overcome the cell membrane barrier and then be able to actively target the intracellular organelle. Current strategy of conjugating either a cell penetrating peptide (CPP) or a subcellular targeting sequence to the molecule of interest only has limited success. We report here a dual peptide conjugation strategy to achieve effective delivery of a non-membrane-penetrating dye 5-carboxyfluorescein (5-FAM) into mitochondria through the incorporation of both a mitochondrial targeting sequence (MTS) and a CPP into one conjugated molecule. Notably, circular dichroism studies reveal that the combined use of α-helix and PPII-like secondary structures has an unexpected, synergistic contribution to the internalization of the conjugate. Our results suggest that although the use of positively charged MTS peptide allows for improved targeting of mitochondria, with MTS alone it showed poor cellular uptake. With further covalent linkage of the MTS-5-FAM conjugate to a CPP sequence (R8), the dually conjugated molecule was found to show both improved cellular uptake and effective mitochondria targeting. We believe these results offer important insight into the rational design of peptide conjugates for intracellular delivery.
Mitochondria are critical regulators of cellular function and survival. Delivery of therapeutic and diagnostic agents into mitochondria is a challenging task in modern pharmacology because the molecule to be delivered needs to first overcome the cell membrane barrier and then be able to actively target the intracellular organelle. Current strategy of conjugating either a cell penetrating peptide (CPP) or a subcellular targeting sequence to the molecule of interest only has limited success. We report here a dual peptide conjugation strategy to achieve effective delivery of a non-membrane-penetrating dye 5-carboxyfluorescein(5-FAM) into mitochondria through the incorporation of both a mitochondrial targeting sequence (MTS) and a CPP into one conjugated molecule. Notably, circular dichroism studies reveal that the combined use of α-helix and PPII-like secondary structures has an unexpected, synergistic contribution to the internalization of the conjugate. Our results suggest that although the use of positively charged MTSpeptide allows for improved targeting of mitochondria, with MTS alone it showed poor cellular uptake. With further covalent linkage of the MTS-5-FAM conjugate to a CPP sequence (R8), the dually conjugated molecule was found to show both improved cellular uptake and effective mitochondria targeting. We believe these results offer important insight into the rational design of peptide conjugates for intracellular delivery.
Mitochondria exhibit
vital and lethal functions in both physiological
and pathological conditions because they provide the most cellular
energy and also function as a regulator of intrinsic pathway of apoptosis.[1] Recently, changes in mitochondria and their interaction
with many proteins were found to be responsible for many diseases
including neurodegeneration and cancer.[2,3] Dysfunctional
mitochondria are also known to have a profound impact on the development
of a host of chronic and aging related conditions.[4] Despite the great potential as a therapeutic target, only
a few drugs are able to actually accumulate in mitochondria.[3] Drug delivery systems that could transport therapeutic
agents specifically into mitochondria are therefore of critical importance
to fulfill this goal.Current approaches for a successful mitochondrial
targeting have
been developed based on various mechanisms including lipophilic cations
such as triphenyl phosphonium (TPP),[5] mitochondria
targeting signal peptide (MTS),[6,7] protein transduction
domain peptide (PTD),[8,9] and DQAsomes-DNA complexes.[10] Chemical conjugation of the therapeutic agent
to a molecule with the ability to target mitochondria provides an
effective strategy and has been used to deliver a great diversity
of cargo into mitochondria,[11−14] including small molecule drugs,[15,16] oligodeoxynucleotides,[17] macromolecules,[18] liposomes,[19] and
proteins.[7,20,21] Among various
targeting agents, mitochondria targeting sequence (MTS), the protein-sorting
peptide consisting of typically 20–40 residues (a.k.a. protein
tags), could arguably represent the best conjugation platform for
targeted delivery of molecules into mitochondria because MTS has a
well-proven role in guiding proteins into mitochondria and also because
MTS can be specifically and precisely processed by mitochondrial processing
proteinases (MPP) to release the delivered molecular cargo in the
mitochondria. Despite the difference in amino acid sequence,[18] all the mitochondria targeting sequences share
the common amphipathic helical feature,[22] and can be recognized by the same receptors and apparatus on the
mitochondrial surface. Although precursor sequences derived from natural
mitochondrial proteins exhibit high specificity in mitochondrial targeting,
several reports have shown that naturally derived MTS peptides have
lower levels of cellular uptake despite their amphipathic and positively
charged nature.[23,24] Therefore, an additional feature
must be included in the design to improve the intracellular access
of MTS conjugates.One widely used strategy to achieve effective
intracellular access
is to conjugate the therapeutic cargo with a cell-penetrating peptide
(CPP)[25−27] such as the HIV transactivator of transcription (Tat),[28−32] penetratin,[33] and polyarginine.[34] It is generally accepted that positively charged
CPP conjugates enter cells primarily through adsorption-mediated endocytosis
pathways.[35,36] Positive charge is a critical element for
CPPs to exert successful membrane translocation,[37] as demonstrated by both protein derived CPPs such as Tat[28,38,39] and de novo designed
CPPs such as octaarginine (R8).[40] Futaki et al. have shown that the “positive patch”
of polyarginine played an essential role in peptide membrane permeability.[41]To achieve improved mitochondrial targeting
specificity and efficacy,
we employed a dual peptide conjugation strategy that incorporates
both CPP and MTS into one molecule. Notably, we found that the secondary
structure of the conjugated peptides (both α-helices and polyproline
II, PPII-like conformation) exhibits a synergistic effect on the cellular
uptake of the resulting conjugate. Scheme 1 shows the molecular design and peptide sequences of the three reported
conjugates. The MTSpeptide, MLRAALSTARRGPRLSRLL, a well-studied natural
presequence from the mitochondrial-oriented protein aldehyde dehydrogenase
(ALDH), was selected as the mitochondrial targeting entity.[42,43] The CPP R8 was conjugated to this mitochondrial targeting
system because of its remarkable ability to assist in cellular internalization.
Three histidines (H3) were introduced in the molecular
design to offer the buffering effect upon protonation of the imidazole
ring inside endosomes or lysosomes, which has been reported to induce
the rupture of the endosomal/lysosomal membrane for the effective
release of the entrapped conjugates into cytosols.[44,45] 5-FAM was used as the fluorescent tracking agent due to its high
quantum efficiency.[46]
Scheme 1
Schematic Illustrations
of (A) the Three Peptide Conjugates: MTS-5-FAM, 5-FAM-HR, and MTS-(5-FAM)-HR,
and (B) Different Cellular Uptake of the Three Conjugates
MTS-5-FAM possessed
α-helical secondary structure and showed no cell membrane-penetrating
capability, but attaching to the cell membrane only. Cell penetrating
peptide 5-FAM-HR exhibited limited cellular uptake. Significant
endocytosis was only observed for MTS-(5-FAM)-HR containing
both MTS and H3R8.
Schematic Illustrations
of (A) the Three Peptide Conjugates: MTS-5-FAM, 5-FAM-HR, and MTS-(5-FAM)-HR,
and (B) Different Cellular Uptake of the Three Conjugates
MTS-5-FAM possessed
α-helical secondary structure and showed no cell membrane-penetrating
capability, but attaching to the cell membrane only. Cell penetrating
peptide5-FAM-HR exhibited limited cellular uptake. Significant
endocytosis was only observed for MTS-(5-FAM)-HR containing
both MTS and H3R8.
Results
and Discussion
Conjugate Characterization
The purities
of the four
studied conjugates were all above 90% according to analytical HPLC
analysis (Supporting Information Figures S1–S4). The observed multiply charged ions of MTS-5-FAM, 5-FAM-HR, MTS-(5-FAM)-HR, and 5-FAM-(RLL)R suggest
that the masses of the four conjugates were 2263.0, 2722.2, 4381.6,
and 2616.6 Da, respectively, by ESI mass spectrometry, in agreement
with the expected exact masses calculated for C97H147N45O20 (2263.5 Da), C122H196N38O31S (2723.2 Da), C188H313N79O42S (4381.5 Da), and C115H194N48O23 (2615.6 Da).
Since the imidazole side-chain of histidine has an acid dissociation
constant (pKa) around 6, histidines under
physiological conditions are not expected to be highly charged. Thus, 5-FAM-HR carries more positive net charges at its arginine guanidinium
groups (pKa around 12) when compared with
that of MTS-5-FAM. MTS-(5-FAM)-HR and 5-FAM-(RLL)R are
expected to carry the most positive charges.
Cellular Uptake
We first used flow cytometry to investigate
the cellular uptake efficacy of the three designed conjugates: 5-FAM-HR, MTS-5-FAM, and MTS-(5-FAM)-HR. In these
experiments, cells were trypsinized to avoid false positive signals
resulting from conjugates associated with the cell membrane via nonspecific
electrostatic interactions.[47] Figure 1A reveals clearly that MTS-(5-FAM)-HR shows
superior cellular entry capability in comparison to both MTS-5-FAM and 5-FAM-HR, as evidenced by its strongest intensity (Supporting Information Figure S5). It is very
surprising to see that MTS-5-FAM actually showed greater
fluorescence intensity than 5-FAM-HR. Because increased
positive charge would likely lead to improved cellular uptake against
various cell lines via electrostatic interaction with negatively charged
cell membranes,[48] one would expect a lower
level of cellular uptake of MTS-5-FAM relative to that
of 5-FAM-HR. The counterintuitive observation of higher
fluorescence signal for MTS-5-FAM might be related to
a difference in secondary structures of MTSpeptide versus R8, which is also known to play a role in cellular uptake. Schepartz
et al. reported that cellular uptake of arginine-rich peptides was
heavily dependent on the positive charge density, and the cellular
uptake was enhanced when the arginines were clustered onto the same
α-helical face.[49]
Figure 1
Representative flow cytometry
results and circular dichroism (CD)
spectra. (A) Quantitative comparison of the fluorescence intensity
(in Geo mean) of three conjugates 5-FAM-HR (red column), MTS-5-FAM (green column), and MTS-(5-FAM)-HR (blue
column) in MCF-7 breast cancer cell line after 4 h treatment with
1 μM peptide conjugates, and untreated cells were used as control.
CD spectra of (B) 50 μM 5-FAM-HR, (C) 50 μM MTS-5-FAM (Insertion: schematic illustration of positive charge
distribution in MTS, red: methionine, blue: arginine.), and (D) 50
μM MTS-(5-FAM)-HR. All the conjugates studied in
CD analysis were dissolved in 20 mM sodium phosphate buffer (pH 7.4,
with 20 mM SDS) at 37 °C.
Representative flow cytometry
results and circular dichroism (CD)
spectra. (A) Quantitative comparison of the fluorescence intensity
(in Geo mean) of three conjugates 5-FAM-HR (red column), MTS-5-FAM (green column), and MTS-(5-FAM)-HR (blue
column) in MCF-7 breast cancer cell line after 4 h treatment with
1 μM peptide conjugates, and untreated cells were used as control.
CD spectra of (B) 50 μM 5-FAM-HR, (C) 50 μM MTS-5-FAM (Insertion: schematic illustration of positive charge
distribution in MTS, red: methionine, blue: arginine.), and (D) 50
μM MTS-(5-FAM)-HR. All the conjugates studied in
CD analysis were dissolved in 20 mM sodium phosphate buffer (pH 7.4,
with 20 mM SDS) at 37 °C.We therefore performed circular dichroism experiments to
investigate
the secondary structures for all the synthesized conjugates. In order
to mimic the hydrophobic environment in which peptide conjugates interact
with cell membranes, peptide conjugates were dissolved in 20 mM sodium
phosphate buffer with 20 mM sodium dodecyl sulfate (SDS) aqueous solution
to obtain a 50 μM solution (pH 7.4).[50,51] The CD spectrum of 5-FAM-HR was characterized by a minimum
at 202 nm (Figure 1B), suggesting a PPII-like
structure of H3R8 in a solution in the presence
of SDS.[52] The CD spectrum of MTS-5-FAM exhibited two minima at 208 and 222 nm (Figure 1C), in agreement with a typical CD absorption for peptides
assuming α-helical conformation. This result is consistent with
a previous report that the chosen MTSpeptide could adopt two helices
located at the N-terminal segment and C-terminal segment.[42] As shown in Figure 1C
inset, positive charges derived from arginine residues are clustered
onto the same face within the α-helical arrangement, which may
contribute to the greater fluorescence signal in flow cytometry for MTS-5-FAM. The CD spectrum of MTS-(5-FAM)-HR reveals
a similar α-helical structure that clearly originates from the
MTS segment. The PPII-like structure from the CPP segment is likely
to be overwhelmed by the signal of MTS due to its relatively lower
CD absorption intensity (Figure 1D). To prove
our assumption, we did a linear combination of the spectra collected
from MTS-5-FAM and 5-FAM-HR (Supporting Information Figure S6). As expected, the obtained
spectrum predicts the spectrum from MTS-(5-FAM)-HR well
under the same conditions. It is also possible that higher cellular
uptake of MTS-5-FAM compared with 5-FAM-HR is
due to the amphiphilic nature of the former molecule.
Intracellular
Distribution
Given that flow cytometry
only provides the overall fluorescence signals, we performed confocal
imaging to study further the intracellular distribution of the endocytosed
conjugates. As shown in Figure 2, cells treated
with MTS-(5-FAM)-HR showed intense green fluorescence throughout
the cytosol, suggesting efficient intracellular access and also successful
endosomal/lysosomal escape. It is noteworthy that the intense green
fluorescence observed from MTS-5-FAM treated cells does
not stem from endocytosed conjugates but from molecules accumulated
within cell membranes. It is very likely that the amphiphilic nature
of MTS-5-FAM α-helices imparts the conjugate with
a high propensity to insert into the cell membrane.[52−55] These membrane entrapped conjugates
cannot be simply removed by trypsinization, thus offering a very high
fluorescent signal in the flow cytometry measurement. The tendency
to stay within cell membrane may also explain the poor intracellular
accumulation of MTS-5-FAM within MCF-7 cells. In contrast,
the green fluorescence for cells treated with 5-FAM-HR,
albeit dim, arises primarily from within cells (Figure 2), implying both a low membrane accumulation tendency and
poor cellular uptake efficiency. The difference in subcellular distribution
of MTS-5-FAM and MTS-(5-FAM)-HR leads us to
speculate that effective entry into cytosols actually benefited from
the combined use of an α-helical segment with a PPII-like unit
in the MTS-(5-FAM)-HR design, in which α-helical structures
afford great binding affinity toward cell membrane while cell-penetrating
segment H3R8 facilitates the entrance to the
cytosols.
Figure 2
Cellular uptake of 5-FAM-HR, MTS-5-FAM,
and MTS-(5-FAM)-HR in MCF-7 cells with lysosome (red, Lysotracker
Red) and nucleus (blue, Hoechst 33342) after 4 h incubation with the
respective conjugate (1 μM). An enlarged image is also included
in the Supporting Information (Figure S7).
Cellular uptake of 5-FAM-HR, MTS-5-FAM,
and MTS-(5-FAM)-HR in MCF-7 cells with lysosome (red, Lysotracker
Red) and nucleus (blue, Hoechst 33342) after 4 h incubation with the
respective conjugate (1 μM). An enlarged image is also included
in the Supporting Information (Figure S7).In order to verify our assumption
that α-helical structures
and PPII-like structures have synergetic effects in cellular uptake
when used together, we designed and synthesized a new conjugate molecule 5-FAM-(RLL)R, in which the MTSpeptide was replaced with a short
α-helix forming peptide. Previous reports have suggested that
a minimum of four α-helical arginines was required for efficient
cell uptake.[49] The -RLLRLLR8- sequence was therefore chosen for the study, with arginines concentrated
on the same face to resemble the secondary conformation of MTS-(5-FAM)-HR.
The secondary structure and cellular uptake of 5-FAM-(RLL)R were
investigated using the same conditions as the previous three conjugates.The CD spectrum of 5-FAM-(RLL)R confirmed the characteristic
α-helical secondary structures, with two minima at around 208
and 222 nm, similar to that of MTS-(5-FAM)-H. The weak PPII-like structure signal was also overwhelmed
by the negative absorption of α-helix at 208 as expected, resulting
in a negative signal at ∼200 nm. In order to compare intracellular
uptake affected by secondary structures incorporated into the newly
developed conjugate, flow cytometry was again performed to acquire
quantitative results at the same conditions in previous study (Supporting Information Figure S8). As shown in
Figure 3B, 5-FAM-(RLL)R showed remarkably
increased cellular uptake on MCF-7 breast cancer cells compared with
that of 5-FAM-HR (616 vs 24 in terms of geo mean fluorescence
intensity). Since the only difference between the two studied molecules
is the use of the α-helix forming peptide in 5-FAM-(RLL)R,
these results clearly support our assumption that α-helical
secondary structures exerted a synergistic effect on cellular uptake
when used together with PPII-like structures.
Figure 3
Investigation of secondary
structure and its function preformed
on cellular uptake study of designed peptide conjugate 5-FAM-(RLL)R.
(A) CD spectrum of 5-FAM-(RLL)R. (B) Representative flow
cytometry results of 5-FAM-HR (red column) and 5-FAM-(RLL)R (green
column). (C) Cellular uptake of 5-FAM-(RLL)2R8 in MCF-7 cells with lysosome (red, Lysotracker Red) and nucleus
(blue, Hoechst 33342) after 4 h incubation with the conjugate (1 μM).
Investigation of secondary
structure and its function preformed
on cellular uptake study of designed peptide conjugate 5-FAM-(RLL)R.
(A) CD spectrum of 5-FAM-(RLL)R. (B) Representative flow
cytometry results of 5-FAM-HR (red column) and 5-FAM-(RLL)R (green
column). (C) Cellular uptake of 5-FAM-(RLL)2R8 in MCF-7 cells with lysosome (red, Lysotracker Red) and nucleus
(blue, Hoechst 33342) after 4 h incubation with the conjugate (1 μM).
Subcellular Colocalization
In order to evaluate if
the dual-conjugated molecules are still capable of targeting mitochondria,
we performed subcellular colocalizaiton experiments. As shown in Figure 4, cells treated with MTS-5-FAM again
showed intense 5-FAM green fluorescence only on the cell membrane,
not within cells, that rarely overlaps with the Mitotracker signal.
The overlap colocalization coefficients (5-FAM and Mitotracker Red)
were calculated to be 0.148 and 0.001 for 5-FAM-HR and MTS-5-FAM, respectively, using the ZEN software with an intensity
threshold of 10000. Cells treated with MTS-(5-FAM)-HR, when
imaged using the same parameter settings, showed very intense green
fluorescence throughout the cell. Although the deposition of conjugates
in the cytosol is critical for further subcellular organelle targeting,
it impedes the study of the conjugate’s mitochondria targeting
efficiency (all mitochondria appear to be colocalized with green signal
from MTS-(5-FAM)-HR). As a consequence, the green signal has
to be significantly attenuated to provide a clear vision, and only
spots containing a very strong green signal remain visible, even though
a partial colocalization of MTS-(5-FAM)-HR green signal with Mitotracker
was observed. The overlap colocalization coefficient (5-FAM and Mitotracker
Red) were calculated to be 0.277 for MTS-(5-FAM)-HR (Supporting Information Figure S10).
Figure 4
Subcellular
colocalization of 5-FAM-HR, MTS-5-FAM, and MTS-(5-FAM)-HR in MCF-7 cells with mitochondria (red,
Mitotracker) and nucleus (blue, Hoechst 33342) after 2 h incubation
of the respective conjugates (5 μM). An enlarged image is also
included in the Supporting Information (Figure
S9).
Subcellular
colocalization of 5-FAM-HR, MTS-5-FAM, and MTS-(5-FAM)-HR in MCF-7 cells with mitochondria (red,
Mitotracker) and nucleus (blue, Hoechst 33342) after 2 h incubation
of the respective conjugates (5 μM). An enlarged image is also
included in the Supporting Information (Figure
S9).To exclude the possibility that
the observed colocalization originated
from the superposition of mitochondria with other conjugate-containing
organelles such as lysosomes, we carefully analyzed our colocalization
results and found that most of the conjugates were out of the lysosomes
after 2 h incubation (Supporting Information Figure
S11). We further performed the colocalization experiment on
HeLa cells (human cervical cancer cell line) that are known to have
a stretched morphology and less superposition between different subcellular
organelles when cultured on a Petri dish. Obvious colocalization between MTS-(5-FAM)-HR and mitochondria was noticed (Supporting Information Figure S12), which confirms the mitochondria
targeting ability of the conjugate. Clearly, the MTS-(5-FAM)-HR shows
the highest targeting efficiency to mitochondria. However, as mentioned
earlier, a significant amount of MTS-(5-FAM)-HR was still out
of mitochondria, which might be either trapped in endosomes/lysosomes
(Figure 2) or en route to mitochondria. The
relatively low colocalization efficiency could be due to the limited
amount and capacity of translocase of the outer or inner mitochondrial
membrane (TOM or TIM) complex that is primarily responsible for actively
transporting cargos with MTS signal into mitochondria.[56] Another possibility for high cytosol retention
might be the partial degradation of MTS-(5-FAM)-HR in lysosomes
during the intracellular transportation process, which could be potentially
addressed in the future by use of MTS peptides of d-amino
acids.The mechanism of mitochondria accumulation of MTS-(5-FAM)-HR is
quite different from the Mitotracker used here or other triphenyl
phosphonium (TPP) based targeting strategies which accumulate into
mitochondria passively (therefore not saturable) due to their characteristic
membrane potential.[57,58] The MTS-(5-FAM)-HR conjugate
reported herein was expected to be transported into mitochondria through
TOM/TIM complex. However, the resolution of fluorescent microscopy
hinders the direct observation of their suborganelle distribution.
Therefore, MitoBlock-6, an inhibitor of TOM/TIM complex, was used
in the colocalization experiment to explore its effect on mitochondria
transportation. Unexpectedly, we found that the use of MitoBlock-6
significantly limited the intracellular accumulation of MTS-(5-FAM)-HR (Supporting Information Figure S13), which might
be a result of inhibition in ATP production since MitoBlock-6 has
been reported to affect the cytochrome C that is critical for ATP
production.[59]Charged molecules or
nanoparticles are known to disrupt cell membranes,
thereby leading to increased intercellular uptake and possible cytotoxicity.[60] We therefore performed experiments to evaluate
the potential cytotoxicity of all four conjugates against MCF-7 cell
line. As shown in Figure 5, the four conjugates
studied in this work did not reveal any noticeable toxicity behavior
at 5 μM for a period of 4 h incubation, a concentration that
was much higher than the concentration used for previous confocal
imaging and flow cytometry experiments (1 μM).
Figure 5
Cell viability of MCF-7
breast cancer cells after 4 h treatment
with 5-FAM-HR, MTS-5-FAM, MTS-(5-FAM)-HR,
and 5-FAM-(RLL)R at three different concentrations (1, 2,
and 5 μM). The results exhibited near nontoxicity of four conjugates
at all three concentrations.
Cell viability of MCF-7breast cancer cells after 4 h treatment
with 5-FAM-HR, MTS-5-FAM, MTS-(5-FAM)-HR,
and 5-FAM-(RLL)R at three different concentrations (1, 2,
and 5 μM). The results exhibited near nontoxicity of four conjugates
at all three concentrations.
Conclusion
In summary, we reported here a dual conjugate
strategy to link
a mitochondria targeting sequence, a cell penetrating peptide, and
a non-membrane-penetrating dye into a conjugated molecule, and studied
its
cellular uptake and mitochondrial targeting behavior. Our results
suggest that both α-helix and polyproline II-like structures
are critical for facilitating the efficient cellular uptake of the
conjugate, and when combined exert a synergistic effect. Although
there are several parameters that require more rigorous evaluation
and detailed studies, these results clearly demonstrate the great
potential of using rationally designed peptide conjugates for intracellular
delivery.
Materials and Methods
Materials
All amino acids were purchased
from Advanced
Automated Peptide Protein Technologies (AAPPTEC, Louisville, KY) and
Rink Amide MBHA Resin was purchased from NovaBiochem (San Diego, CA).
5-FAM was obtained from AnaSpec, Inc. (Fremont, CA), and all other
reagents and solvents were sourced through VWR.
Cell Culture
MCF-7 cells were kindly provided by the
Wirtz Lab (Department of Chemical and Biomolecular Engineering, Johns
Hopkins University). Cells were cultured according to providers’
protocols. MCF-7humanbreast cancer cells were grown in DMEM with
10% fetal bovine serum (FBS, Invitrogen) and 1% antibiotics (Invitrogen).
Cells were incubated at 37 °C in a humidified incubator with
a 5% CO2 atmosphere.
Conjugate Synthesis and
Characterization
All peptide
conjugates were synthesized using standard 9-fluorenylmethloxycarbonyl
(Fmoc) solid phase synthesis techniques. The peptides Fmoc-K(Mtt)GH3R8-Rink, Fmoc-MLRA2LSTAR2GPRLSRL2GK(Mtt)-Rink, Fmoc-MLRA2LSTAR2GPRLSRL2K(Mtt)GH3R8-Rink, and Fmoc-K(Mtt)GRL2RL2R8-Rink were synthesized on a 0.25
mmol scale on the Focus XC automated peptide synthesizer (AAPPTEC,
Louisville, KY). For all peptide conjugates, 5-FAM was manually coupled
at the peptide N- or C-terminus (after Mtt removal) with 5-FAM/HBTU/DIEA
at a ratio of 4:4:10 relative to the peptide, shaken overnight at
room temperature. Fmoc deprotections were performed using a 20% 4-methylpiperidine
in DMF solution for 10 min and repeated once. Mtt deprotections were
carried out using a mixture of TFA/TIS/DCM at a ratio of 4:5:91 for
5 min, repeating twice. Acetylation was performed on α-amino
groups of N-terminus amino acids using a 20% acetic anhydride in DMF
solution with 100 μL DIEA, shaken for 15 min, and the coupling
was repeated once. In all cases, reactions were monitored by the ninhydrin
test (Anaspec Inc., Fremont, CA) for free amines. Completed peptides
were cleaved from the solid support using a mixture of TFA/TIS/H2O at a ratio of 92.5:2.5:5 for 2.5 h. Cold diethyl ether was
added to precipitate the crude products, which were collected and
dried under vacuum overnight.All the conjugates were purified
by preparative RP-HPLC using a Varian ProStar Model 325 HPLC (Agilent
Technologies, Santa Clara, CA) equipped with a fraction collector.
Separations were performed using a Varian PLRP-S column (100 Å,
10 μm, 150 × 25 mm) monitoring at 440 nm (for 5-FAM) and
220 (for peptide backbone). Collected fractions were analyzed by ESI-MS
(LDQ Deca iontrap mass spectrometer, Thermo Finnigan, USA) and those
containing the target molecules were combined and lyophilized (FreeZone
−105 °C, Labconco, Kansas City, MO), and then stored at
−4 °C.The purity of all the conjugates was analyzed
by HPLC using the
following conditions: Agilent Zorbax-C18 column (5 μm, 4.6 ×
150 mm); the flow rate was 1 mL/min, with the mobile phase starting
from 5% MeCN (with 0.1% TFA) at 0 min to 95% MeCN (with 0.1% TFA at
25 min, and gradient changing back to the initial conditions at 26
min and holding at 5% MeCN for 4 min; the monitored wavelength was
220 nm. Peptide masses were determined by ESI-MS.
Circular Dichroism
(CD) Measurement
To determine the
peptide conformation, the CD spectra of all the conjugates (50 μM
in 20 mM sodium phosphate buffer with 20 mM SDS) were recorded on
a J-710 spectropolarimeter (JASCO, Easton, MD) from 190 to 260 nm,
and the signal was converted from ellipticity (mdeg) to mean molar
ellipticity per residue (deg·cm2·dmol–1·residue–1).
Cellular Uptake of Peptide
Conjugates
To investigate
the cellular uptake efficacy of the four designed conjugates, MCF-7
cells were seeded onto a 24-well plate at 1 × 105 cells/well,
and allowed to attach overnight. The medium was replaced with fresh
medium containing the appropriate conjugate at 1 μM, and incubated
with the cells for 4 h. The cells were then washed with DPBS twice,
trypsinized, collected, washed twice with ice cold DPBS, and finally
resuspended in 200 μL DPBS. The fluorescence intensity from
endocytosed 5-FAM was analyzed using a FACScalibur flow cytometer
(BD Biosciences, San Jose, CA) using the FL1 (530/30) channel.
Cytotoxicity
MCF-7 cells were seeded onto 96-well plate
at 5 × 103 cells/well, and allowed to attach overnight.
The medium was replaced with fresh medium containing various concentrations
of MTS-5-FAM, 5-FAM-HR, MTS-(5-FAM)-HR,
or 5-FAM-(RLL)R, and incubated for 48 h. The cell viability
was determined using the SRB method according to the manufacturer’s
protocol (TOX-6, Sigma, USA).The subcellular location
of the endocytosed conjugates was investigated using confocal microscopy.
Briefly, MCF-7 or HeLa cells were seeded onto an 8-well glass bottom
plate (Labtek, Scott’s Valley, CA) pretreated with type I rat
tail collagen (Invitrogen) at 4 × 104 cells/well,
and allowed to attach overnight. For TIM/TOM complex inhibition study,
cells were pretreated with 50 μM MitoBlock-6 for 15 min before
conjugate addition. The cells were incubated with 5 μM peptide
conjugates for 2 h. Thirty minutes before the washing step, 100 nM
Lysotracker Red (Invitrogen) or Mitotracker Red (Invitrogen) was added
with 10 μg/mL Hoechst 33342 (Invitrogen). The cells were then
incubated in the phenol red free DMEM (Corning, Tewksbury, MA) supplemented
with 10% FBS and imaged using a Zeiss 510 confocal laser scanning
fluorescent microscope (Frankfurt, Germany).
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