Literature DB >> 25546561

Determination of the action modes of cellulases from hydrolytic profiles over a time course using fluorescence-assisted carbohydrate electrophoresis.

Qing Zhang1, Xiaomei Zhang, Peipei Wang, Dandan Li, Guanjun Chen, Peiji Gao, Lushan Wang.   

Abstract

Fluorescence-assisted carbohydrate electrophoresis (FACE) is a sensitive and simple method for the separation of oligosaccharides. It relies on labeling the reducing ends of oligosaccharides with a fluorophore, followed by PAGE. Concentration changes of oligosaccharides following hydrolysis of a carbohydrate polymer could be quantitatively measured continuously over time using the FACE method. Based on the quantitative analysis, we suggested that FACE was a relatively high-throughput, repeatable, and suitable method for the analysis of the action modes of cellulases. On account of the time courses of their hydrolytic profiles, the apparent processivity was used to show the different action modes of cellulases. Cellulases could be easily differentiated as exoglucanases, β-glucosidases, or endoglucanases. Moreover, endoglucanases from the same glycoside hydrolases family had a variety of apparent processivity, indicating the different modes of action. Endoglucanases with the same binding capacities and hydrolytic activities had similar oligosaccharide profiles, which aided in their classification. The hydrolytic profile of Trichoderma reesei Cel12A, an endoglucanases from T. reesei, contained glucose, cellobiose, and cellotriose, which revealed that it may have a new glucosidase activity, corresponding to that of EC 3.2.1.74. A hydrolysate study of a T. reesei Cel12A-N20A mutant demonstrated that the FACE method was sufficiently sensitive to detect the influence of a single-site mutation on enzymatic activity.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Action mode; Cellulase; Fluorescence-assisted carbohydrate electrophoresis; Quantitative analysis

Mesh:

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Year:  2015        PMID: 25546561     DOI: 10.1002/elps.201400563

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  7 in total

1.  Synergistic mechanism of GH11 xylanases with different action modes from Aspergillus niger An76.

Authors:  Shu Zhang; Sha Zhao; Weihao Shang; Zijuan Yan; Xiuyun Wu; Yingjie Li; Guanjun Chen; Xinli Liu; Lushan Wang
Journal:  Biotechnol Biofuels       Date:  2021-05-10       Impact factor: 6.040

2.  Biochemical and structural characterization of a novel halotolerant cellulase from soil metagenome.

Authors:  Roma Garg; Ritika Srivastava; Vijaya Brahma; Lata Verma; Subramanian Karthikeyan; Girish Sahni
Journal:  Sci Rep       Date:  2016-12-23       Impact factor: 4.379

3.  A Highly Efficient Xylan-Utilization System in Aspergillus niger An76: A Functional-Proteomics Study.

Authors:  Weili Gong; Lin Dai; Huaiqiang Zhang; Lili Zhang; Lushan Wang
Journal:  Front Microbiol       Date:  2018-03-22       Impact factor: 5.640

4.  Subsite-specific contributions of different aromatic residues in the active site architecture of glycoside hydrolase family 12.

Authors:  Xiaomei Zhang; Shuai Wang; Xiuyun Wu; Shijia Liu; Dandan Li; Hao Xu; Peiji Gao; Guanjun Chen; Lushan Wang
Journal:  Sci Rep       Date:  2015-12-16       Impact factor: 4.379

5.  Ligand-binding specificity and promiscuity of the main lignocellulolytic enzyme families as revealed by active-site architecture analysis.

Authors:  Li Tian; Shijia Liu; Shuai Wang; Lushan Wang
Journal:  Sci Rep       Date:  2016-03-24       Impact factor: 4.379

6.  In silico Identification and Taxonomic Distribution of Plant Class C GH9 Endoglucanases.

Authors:  Siddhartha Kundu; Rita Sharma
Journal:  Front Plant Sci       Date:  2016-08-12       Impact factor: 5.753

7.  Synergistic Cellulose Hydrolysis Dominated by a Multi-Modular Processive Endoglucanase from Clostridium cellulosi.

Authors:  Min Yang; Kun-Di Zhang; Pei-Yu Zhang; Xia Zhou; Xiao-Qing Ma; Fu-Li Li
Journal:  Front Microbiol       Date:  2016-06-15       Impact factor: 5.640

  7 in total

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