Literature DB >> 25546455

Properties of nucleic acid staining dyes used in gel electrophoresis.

Alicia M Haines1, Shanan S Tobe, Hilton J Kobus, Adrian Linacre.   

Abstract

Nucleic acid staining dyes are used for detecting nucleic acids in electrophoresis gels. Historically, the most common dye used for gel staining is ethidium bromide, however due to its toxicity and mutagenicity other dyes that are safer to the user and the environment are preferred. This Short Communication details the properties of dyes now available and their sensitivity for detection of DNA and their ability to permeate the cell membrane. It was found that GelRed™ was the most sensitive and safest dye to use with UV light excitation, and both GelGreen™ and Diamond™ Nucleic Acid Dye were sensitive and the safer dyes using blue light excitation.
© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Ethidium bromide; GelGreen™; GelRed™; RedSafe™; SYBR® Green I

Mesh:

Substances:

Year:  2015        PMID: 25546455     DOI: 10.1002/elps.201400496

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  8 in total

Review 1.  DNA dyes: toxicity, remediation strategies and alternatives.

Authors:  Abhrajit Debroy; Mohini Yadav; Radhika Dhawan; Shubhankhi Dey; Nancy George
Journal:  Folia Microbiol (Praha)       Date:  2022-03-15       Impact factor: 2.629

2.  Targeting Cysteine Thiols for in Vitro Site-specific Glycosylation of Recombinant Proteins.

Authors:  Yoo Jung Choi; Jinhui Zhu; Steve Chung; Naveed Siddiqui; Qingping Feng; Peter B Stathopulos
Journal:  J Vis Exp       Date:  2017-10-04       Impact factor: 1.355

3.  Application of GelGreen™ in Cesium Chloride Density Gradients for DNA-Stable Isotope Probing Experiments.

Authors:  Jingfeng Gao; Kailing Pan; Hongyu Li; Xiaoyan Fan; Lixin Sun; Shujun Zhang; Yongqing Gao
Journal:  PLoS One       Date:  2017-01-05       Impact factor: 3.240

4.  Dicationic styryl dyes for colorimetric and fluorescent detection of nucleic acids.

Authors:  Kotchakorn Supabowornsathit; Kriangsak Faikhruea; Boonsong Ditmangklo; Theeranuch Jaroenchuensiri; Sutthida Wongsuwan; Sirikarn Junpra-Ob; Ilada Choopara; Tanapat Palaga; Chanat Aonbangkhen; Naraporn Somboonna; Jaru Taechalertpaisarn; Tirayut Vilaivan
Journal:  Sci Rep       Date:  2022-08-22       Impact factor: 4.996

5.  Development of highly sensitive and low-cost DNA agarose gel electrophoresis detection systems, and evaluation of non-mutagenic and loading dye-type DNA-staining reagents.

Authors:  Ken Motohashi
Journal:  PLoS One       Date:  2019-09-09       Impact factor: 3.240

6.  A low-cost smart system for electrophoresis-based nucleic acids detection at the visible spectrum.

Authors:  Eduardo Nogueira Cunha; Maria Fernanda Bezerra de Souza; Daniel Carlos Ferreira Lanza; João Paulo Matos Santos Lima
Journal:  PLoS One       Date:  2020-10-15       Impact factor: 3.240

7.  Label-free profiling of DNA aptamer-small molecule binding using T5 exonuclease.

Authors:  Obtin Alkhamis; Weijuan Yang; Rifat Farhana; Haixiang Yu; Yi Xiao
Journal:  Nucleic Acids Res       Date:  2020-11-18       Impact factor: 16.971

Review 8.  Potential of Flow Cytometric Approaches for Rapid Microbial Detection and Characterization in the Food Industry-A Review.

Authors:  Elena Zand; Antje Froehling; Christoph Schoenher; Marija Zunabovic-Pichler; Oliver Schlueter; Henry Jaeger
Journal:  Foods       Date:  2021-12-15
  8 in total

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