Literature DB >> 25544858

Mass spectrometry-based proteomic approaches for discovery of HIV-host interactions.

Yang Luo1, Mark A Muesing1.   

Abstract

A molecular understanding of viral infection requires a multi-disciplinary approach. Mass spectrometry has emerged as an indispensable tool to investigate the complex and dynamic interactions between HIV-1 and its host. It has been employed to study protein associations, changes in protein abundance and post-translational modifications occurring after viral infection. Here, we review and provide examples of mass spectrometry-based proteomic approaches currently used to explore virus-host interaction. Efforts in this area are certain to accelerate the discovery of the unique molecular strategies utilized by the virus to commandeer the cell as well as mechanisms of host defense.

Entities:  

Keywords:  HIV-1; MS-based proteomics; affinity purification; post-translational modification; quantitative MS; virus–host interactions

Year:  2014        PMID: 25544858      PMCID: PMC4277201          DOI: 10.2217/fvl.14.86

Source DB:  PubMed          Journal:  Future Virol        ISSN: 1746-0794            Impact factor:   1.831


  89 in total

1.  Identification of cellular proteins required for replication of human immunodeficiency virus type 1.

Authors:  Natallia Dziuba; Monique R Ferguson; William A O'Brien; Anthony Sanchez; Andrew J Prussia; Natalie J McDonald; Brian M Friedrich; Guangyu Li; Michael W Shaw; Jinsong Sheng; Thomas W Hodge; Donald H Rubin; James L Murray
Journal:  AIDS Res Hum Retroviruses       Date:  2012-04-20       Impact factor: 2.205

2.  Expression cloning of new receptors used by simian and human immunodeficiency viruses.

Authors:  H K Deng; D Unutmaz; V N KewalRamani; D R Littman
Journal:  Nature       Date:  1997-07-17       Impact factor: 49.962

3.  The conserved set of host proteins incorporated into HIV-1 virions suggests a common egress pathway in multiple cell types.

Authors:  Michael E Linde; David R Colquhoun; Ceereena Ubaida Mohien; Thomas Kole; Veronica Aquino; Robert Cotter; Nathan Edwards; James E K Hildreth; David R Graham
Journal:  J Proteome Res       Date:  2013-03-29       Impact factor: 4.466

4.  Interaction of HIV-1 Gag with the clathrin-associated adaptor AP-2.

Authors:  Melissa Batonick; Manuel Favre; Michael Boge; Paul Spearman; Stefan Höning; Markus Thali
Journal:  Virology       Date:  2005-09-01       Impact factor: 3.616

5.  Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling.

Authors:  Guoqiang Xu; Jeremy S Paige; Samie R Jaffrey
Journal:  Nat Biotechnol       Date:  2010-07-18       Impact factor: 54.908

6.  Proteomic studies reveal coordinated changes in T-cell expression patterns upon infection with human immunodeficiency virus type 1.

Authors:  Jeffrey H Ringrose; Rienk E Jeeninga; Ben Berkhout; Dave Speijer
Journal:  J Virol       Date:  2008-02-20       Impact factor: 5.103

7.  Elucidating novel hepatitis C virus-host interactions using combined mass spectrometry and functional genomics approaches.

Authors:  Marie-Anne Germain; Laurent Chatel-Chaix; Bridget Gagné; Éric Bonneil; Pierre Thibault; Fabrine Pradezynski; Benoît de Chassey; Laurène Meyniel-Schicklin; Vincent Lotteau; Martin Baril; Daniel Lamarre
Journal:  Mol Cell Proteomics       Date:  2013-10-29       Impact factor: 5.911

Review 8.  Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics.

Authors:  Alexander Leitner; Thomas Walzthoeni; Abdullah Kahraman; Franz Herzog; Oliver Rinner; Martin Beck; Ruedi Aebersold
Journal:  Mol Cell Proteomics       Date:  2010-03-31       Impact factor: 5.911

9.  Contribution of MS-Based Proteomics to the Understanding of Herpes Simplex Virus Type 1 Interaction with Host Cells.

Authors:  Enrique Santamaría; Virginia Sánchez-Quiles; Joaquín Fernández-Irigoyen; Fernando Corrales
Journal:  Front Microbiol       Date:  2012-03-20       Impact factor: 5.640

10.  HIV-1 Vpr-mediated G2 arrest involves the DDB1-CUL4AVPRBP E3 ubiquitin ligase.

Authors:  Jean-Philippe Belzile; Ghislaine Duisit; Nicole Rougeau; Johanne Mercier; Andrés Finzi; Eric A Cohen
Journal:  PLoS Pathog       Date:  2007-07       Impact factor: 6.823

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  2 in total

1.  HIV-host interactome revealed directly from infected cells.

Authors:  Yang Luo; Erica Y Jacobs; Todd M Greco; Kevin D Mohammed; Tommy Tong; Sarah Keegan; James M Binley; Ileana M Cristea; David Fenyö; Michael P Rout; Brian T Chait; Mark A Muesing
Journal:  Nat Microbiol       Date:  2016-05-23       Impact factor: 17.745

Review 2.  Recent 5-year Findings and Technological Advances in the Proteomic Study of HIV-associated Disorders.

Authors:  Lijun Zhang; Xiaofang Jia; Jun-O Jin; Hongzhou Lu; Zhimi Tan
Journal:  Genomics Proteomics Bioinformatics       Date:  2017-04-06       Impact factor: 7.691

  2 in total

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