Literature DB >> 25540805

Heterozygous Polg mutation causes motor dysfunction due to mtDNA deletions.

Satoshi Fuke1, Mizue Kametani2, Kazuyuki Yamada3, Takaoki Kasahara2, Mie Kubota-Sakashita2, Gregory C Kujoth4, Tomas A Prolla5, Seiji Hitoshi6, Tadafumi Kato2.   

Abstract

OBJECTIVE: Mutations in nuclear-encoded mitochondrial DNA (mtDNA) polymerase (POLG) are known to cause autosomal dominant chronic progressive external ophthalmoplegia (adCPEO) with accumulation of multiple mtDNA deletions in muscles. However, no animal model with a heterozygous Polg mutation representing mtDNA impairment and symptoms of CPEO has been established. To understand the pathogenic mechanism of CPEO, it is important to determine the age dependency and tissue specificity of mtDNA impairment resulting from a heterozygous mutation in the Polg gene in an animal model.
METHODS: We assessed behavioral phenotypes, tissue-specific accumulation of mtDNA deletions, and its age dependency in heterozygous Polg (D257A) knock-in mice carrying a proofreading-deficient mutation in the Polg.
RESULTS: Heterozygous Polg (D257A) knock-in mice exhibited motor dysfunction in a rotarod test. Polg (+/D257A) mice had significant accumulation of multiple mtDNA deletions, but did not show significant accumulation of point mutations or mtDNA depletion in the brain. While mtDNA deletions increased in an age-dependent manner regardless of the tissue even in Polg (+/+) mice, the age-dependent accumulation of mtDNA deletions was enhanced in muscles and in the brain of Polg (+/D257A) mice.
INTERPRETATION: Heterozygous Polg (D257A) knock-in mice showed tissue-specific, age-dependent accumulation of multiple mtDNA deletions in muscles and the brain which was likely to result in neuromuscular symptoms. Polg (+/D257A) mice may be used as an animal model of adCPEO associated with impaired mtDNA maintenance.

Entities:  

Year:  2014        PMID: 25540805      PMCID: PMC4265062          DOI: 10.1002/acn3.133

Source DB:  PubMed          Journal:  Ann Clin Transl Neurol        ISSN: 2328-9503            Impact factor:   4.511


Introduction

Chronic progressive external ophthalmoplegia (CPEO) is a mitochondrial neuromuscular disease presenting progressive external ophthalmoplegia and other neuromuscular symptoms. On the molecular level, the accumulation of multiple mtDNA deletions in muscles is characteristic of CPEO, which is distinct from other inherited mitochondrial diseases because of point mutations or copy number reduction of mtDNA in affected tissues.1–3 CPEO is a relatively late-onset disease accompanied by neurological symptoms such as ataxia, exercise intolerance, fatigue, optic atrophy, cognitive impairment, and mood disorders.4–18 Postmortem brain analyses showed increased accumulation of multiple mtDNA deletions in the brain.4,7 Thus, neurological symptoms in CPEO likely result from the accumulation of multiple mtDNA deletions in the brain. Mutations in nuclear-encoded proteins involved in mtDNA maintenance cause inherited CPEO.3,8–11,18–21 The nuclear gene encoding the catalytic subunit of the mtDNA polymerase, known as DNA polymerase γ (Polg), plays a prominent role in replication and repair, which are essential for mtDNA synthesis.14 Heterozygous mutations in POLG cause autosomal dominant CPEO. Thus, a heterozygous mutant Polg knock-in mouse may be an appropriate animal model for CPEO. Homozygous knock-in mice that carry proofreading-deficient Polg (Polg) exhibited marked accumulation of mtDNA point mutations and showed systemic physical abnormalities and reduced life span; these mice have been proposed to be an animal model of premature aging.22–27 However, heterozygous Polg mice were reportedly normal.22–30 In this study, we examined heterozygous Polg mice in detail. These mice exhibited motor dysfunction and accumulation of mtDNA deletions in the brain and muscles in an age-dependent and tissue-specific manner.

Materials and Methods

Animals and behavioral analysis

The Polg mouse was described previously.23 In this study, Polg mice were backcrossed for more than six generations into C57BL/6JJcl; next, selective breeding using 104 microsatellite markers covering the entire genome enabled the production of mutant mice with a genetic background similar to C57BL/6J for >99% of offspring by mating male Polg mice with female C57BL/6JJcl mice purchased from CLEA Japan (Tokyo, Japan). We examined 34 weeks old male mice kept in cages with a running wheel for 7 weeks from 19 to 25 weeks. The details of a conventional behavioral test battery are described in Data S1. All animal experiments were performed in accordance with the protocols that had been approved by the Animal Experiment Committee of RIKEN (Wako, Saitama, Japan) and Shiga University of Medical Science (Otsu, Shiga, Japan). The number of animals used their suffering was minimized as much as possible.

Analysis of mtDNA point mutation

mtDNAs were purified from mice frontal lobe using the mtDNA Extractor CT kit (Wako Pure Chemical Industries, Osaka, Japan), which is based on the alkaline-SDS method for the plasmid DNA purification followed by removal of sodium iodide and RNA by RNaseA treatment. The 1782-bp fragment (#13557–15340) of mtDNA (NC_005089) from each genotype (n = 3) was digested using the restriction endonucleases XhoI and BglII and directly cloned into pBluescript SK+ plasmid DNA without polymerase chain reaction (PCR) amplification. From each mouse tissue, more than 12 independent clones were sequenced and the average mutation frequency was examined (Polg mice: 48 total clones, Polg mice: 47 total clones, Polg mice: 53 total clones). More than 21,000 nucleotides were analyzed from each mouse.

Southern blot analysis

Purified total mtDNA was either left undigested or digested by incubation with restriction endonuclease BglII (Takara Bio, Shiga, Japan). After electrophoresis and depurination, alkaline blotting was performed by capillary transfer. mtDNAs were detected using the Digoxigein (DIG)-labeled DNA probe for mouse mtDNA, which was described previously.31 The DIG-labeled DNA probes for the control region (D-loop), ND1, and COX1 were synthesized using the PCR DIG Probe Synthesis Kit (Roche Diagnostics, Mannheim, Germany), and whole mtDNA probe was synthesized from Taq I-digested mouse whole mtDNA using random primers and the BcaBEST DIG labeling kit (Takara).

PCR analysis

All primer sequences are described in Table S1. For PCR, mouse mtDNA was amplified from 10 ng of purified mtDNA with the 0.2 μmol/L primers D3 and D4,31 which face outward from the D-loop of mtDNA, using SYBR Premix Ex Taq reagent (Takara Bio) with the following protocol: 95°C for 20 sec, 55°C for 20 sec, and 72°C for 13 min (for a long-extension PCR) or 80 sec (for a short-extension PCR), 35 cycles after an initial denaturation at 95°C for 1 min. For quantitative real-time PCR (qPCR) analysis, each PCR product was separately amplified from 50 ng of total DNA or 5 ng of purified mtDNA in a 10 μL reaction using SYBR Premix Ex Taq reagent. For deleted mtDNA molecules, qPCR was based on short-extension PCR. Accumulation of mtDNA deletions was assessed by determining the ratio to total mtDNA quantified with amplification of the D-loop using the primer pair D1 and D2. Other primer sets were designed to anneal to the COX1 gene and the ND4 gene for mtDNA, and the ApoB gene for nuclear DNA. Copy number was quantified by determining the ratio of total mtDNA to nuclear DNA. Real-time qPCR reactions were carried out in quadruplicate for all measurements. In every run, the quantities were calibrated using the standard curves with each control plasmid (R2 > 0.99), as described previously.32 Only a standard curve of mtDNA deletions was used to standardize the differences among runs and was calculated between Ct values and the logarithm of concentration of extracted mtDNA from old Polg mice (>60 weeks old) within the linear range (Fig. S4B, R2 > 0.95).

In vivo mtDNA labeling and Southwestern blot analysis

Newly synthesized mtDNA molecules were labeled by 5-bromo-2-deoxyuridine (BrdU) treatment and detected by Southwestern blot analysis using anti-BrdU antibody. Eight-week-old, male C57BL/6J mice (CLEA Japan) were injected intraperitoneally with prewarmed 2′-Deoxyuridine, 5′-Triphosphate (dUTP) or BrdU (500 mg/kg body weight; 50 mg/mL; NACALAI TESQUE, Kyoto, Japan) dissolved in 0.1 mol/L NaOH and adjusted to neutral pH. mtDNA was sampled each hour from 0–12 h and at 24, 36, 48, 60, 72, 84, and 96 h after intraperitoneal injection. Southwestern blot analysis was developed using a method described previously.33 mtDNA was digested by incubation with the restriction endonuclease EagI (New England Biolabs, Beverly, MA) and transferred using the same method used for Southern blot analysis. After BrdU imaging with anti-BrdU antibody (Becton Dickinson Immunocytometry Systems, San Jose, CA), and an HRP-conjugated anti-mouse IgG secondary antibody (Jackson ImmunoResearch Laboratories, West Grove, PA) by Western Lightning™ Chemiluminescence Reagent (Perkin Elmer, Waltham, MA) and LAS-3000 (FUJIFILM, Tokyo, Japan), antibodies were stripped for Southern blot analysis. The relative levels of newly generated mtDNA after injection was quantified by determining the value of incorporation of BrdU into mtDNA based on the BrdU/mtDNA signal intensity ratio measured using Multi Gauge Ver 2.2 software (FUJIFILM).

Cell culture and immunofluorescence analysis

Primary neurons were isolated from mouse embryos at gestational day 17–18 and cultured as described previously.34 To detect localization of BrdU signals in the mitochondria as an indicator of newly synthesized mtDNA, neurons were cultured in the presence 10 μmol/L BrdU for 48 h after 7 days of incubation for differentiation. Neurons were fixed and immunocytochemically stained as reported previously.35 In some experiments, neurons were also cultured in the presence of 100 nmol/L MitoTracker Red CM-H2XRos for 1 h before fixation or were incubated with NeuroTrace Red Fluorescent Nissl Stain (Life Technologies, Carlsbad, CA) at room temperature for 20 min following the anti-BrdU staining. Images were acquired using a confocal microscope (FV1000; Olympus, Tokyo, Japan) from at least three independent culture preparation. Protocols to isolate neural stem cells and generate neurospheres from embryonic brain in vitro have been described previously.36

Statistical analysis

The results of quantitative experiments were analyzed by parametric or nonparametric tests after conducting a Kolmogorov–Smirnov test to confirm a normal distribution. A two-tailed test was used for all analysis. Statistical significance (P < 0.05) was determined using SPSS 18.0 software (SPSS, Chicago, IL) and KyPlot 4.0 (KyensLab, Tokyo, Japan).

Results

Behavioral phenotypes of Polg mice

We examined 34 weeks old male mice carrying the heterozygous Polg mutation (referred to as Polg) using a conventional behavioral test battery. Homozygous Polg-mutant mice (referred to as Polg mice) were also assessed as a positive control group for mitochondrial dysfunction, apoptosis, and sarcopenia in skeletal muscle.25,26,28 As expected, Polg mice showed significantly lower body weight than mice of other genotypes, poor performance in the rotarod test, and reduced spontaneous motor activity in the open field test, elevated plus maze, and Y-maze test (Fig. S1). In the rotarod test, not only Polg mice but also Polg mice showed significantly poor performance than Polg mice for a number of trials (Fig. 1). Polg mice did not differ from Polg mice in other tests. The result indicates that the motor dysfunction caused by the heterozygous mutation in Polg is milder than that caused by the homozygous mutation.
Figure 1

Rotarod test for evaluating motor function among Polg mice (n = 9), Polg (n = 10), and Polg (n = 10) mice. The general linear model repeated measures ANOVA followed by Tukey’s honestly significant difference (HSD) (mean rotations ± SEM) showed significant effects of genotype (P = 0.026) and days (P < 1.00 × 10−10), but no interaction between genotype and days (P = 0.082). Polg mice generally showed lower performance than Polg mice (P = 0.077), which was similar to Polg mice (Polg mice vs. Polg mice: P = 0.885, Polg mice vs. Polg mice: P = 0.029). These results were supported by significant differences between Polg and Polg mice (†P < 0.05), or Polg mice (*P < 0.05) in analysis of each trial.

Rotarod test for evaluating motor function among Polg mice (n = 9), Polg (n = 10), and Polg (n = 10) mice. The general linear model repeated measures ANOVA followed by Tukey’s honestly significant difference (HSD) (mean rotations ± SEM) showed significant effects of genotype (P = 0.026) and days (P < 1.00 × 10−10), but no interaction between genotype and days (P = 0.082). Polg mice generally showed lower performance than Polg mice (P = 0.077), which was similar to Polg mice (Polg mice vs. Polg mice: P = 0.885, Polg mice vs. Polg mice: P = 0.029). These results were supported by significant differences between Polg and Polg mice (†P < 0.05), or Polg mice (*P < 0.05) in analysis of each trial.

Accumulation of mtDNA deletions in the brain of Polg mice

The motor dysfunction in Polg mice prompted us to investigate whether mtDNA was impaired by the heterozygous mutation in Polg. Therefore, we evaluated mtDNA alterations in the brain of Polg mice. Southern blot analysis of purified mtDNA using a probe for the control region (D-loop) (Fig. 2A and B) showed the presence of small mtDNAs corresponding to deletion mutants in the frontal lobe of Polg mice. These small mtDNAs were observed in the frontal lobe of Polg mice at 62 weeks of age upon overexposure (Fig. 2B). However, small mtDNAs were not detectable in Polg mice at 24 weeks and in Polg mice at 62 weeks at the same experimental condition. Additionally, apparent multiple mtDNA signals were observed in Polg mice at 62 weeks, subtle signals were observed at 24 weeks (Fig. 2A). Consistent with the results of previous studies, there was no detectable signal other than full-length mtDNA using probes for gene-encoding regions of mtDNA, even in Polg mice (Fig. S2A). Accumulation of multiple mtDNA deletions in the frontal lobe of Polg mice at 62 weeks was confirmed by PCR analyses (Fig. 2C–E). Long-range PCR amplification of mtDNA revealed the presence of variously sized mtDNA molecules with deletions in the brain of Polg mice (Fig. 2C). Full-length mtDNA was observed, but there were fewer deletion molecules in Polg mice than in Polg mice. Moreover, short-extension PCR was used to selectively amplify small mtDNA molecules to clarify the difference between Polg and Polg mice (Fig. 2D). Using highly sensitive qPCR analysis (see Materials and Methods, Fig. S2B and C), significantly increased accumulation of mtDNA deletions was observed in Polg mice (Fig. 2E). In frontal lobe of Polg mice, there was a reduction in protein level of mtDNA-encoded subunits of Complex IV (Fig. S3).
Figure 2

mtDNA analysis in the brain of mice. (A) Southern blot analysis of the frontal lobe mtDNA using a probe for the control region of mtDNA. Signals of full-length mtDNA (arrowhead), 7S DNA forming the displacement loop (D-loop; arrow), and mtDNA deletions (square bracket) can be observed. Signals for mtDNAs smaller than the full-length 16.5-kb signal were detected strongly in the frontal lobe of Polg mice at 62 weeks and more subtly at 24 weeks. (B) Overexposed Southern blot analysis of mtDNA in the frontal lobe of Polg and Polg mice in panel A. Modest mtDNA signals (open arrowheads) were detectable in Polg mice, but not in Polg mice. (C) Long-range PCR of the frontal lobe mtDNA. Full-length mtDNA (arrow head) in all mice and deletion molecule size (square bracket) in Polg mice (n = 3) were observed. (D) Short-extension PCR for selective amplification of deletion molecules. Amplicon-derived mtDNA deletions in the frontal lobe were more obvious in Polg mice than Polg mice. (E) Quantitative analysis of accumulation of mtDNA deletions in the frontal lobe using qPCR. Accumulation levels were determined using the D-loop (white), COX1 (gray), or ND4 (black) region of mtDNA as a reference (n = 3, mean ± SD, *P < 0.02, t-test). (F) Quantitative analysis of mtDNA point mutation in the frontal lobe of mice at 62 weeks. Numbers of total mutations (white columns, Welch ANOVA followed by Dunnett’s T3 test) and nonsynonymous mutations (gray columns, one-way ANOVA followed by Tukey’s HSD) are indicated (n = 3, mean ± SD, *P < 0.025). (G) Analysis of mtDNA copy number in the frontal lobe, posterior cortex, basal ganglia, and cerebellum of mice: Polg mice (white columns), Polg mice (gray columns), and Polg mice (black columns). The vertical axis represents the relative value normalized to the average copy number of mtDNA in frontal lobe of Polg mice (n = 3, mean ± SD, **P < 0.01, *P < 0.05, Welch ANOVA followed by the Dunnett’s T3 test).

mtDNA analysis in the brain of mice. (A) Southern blot analysis of the frontal lobe mtDNA using a probe for the control region of mtDNA. Signals of full-length mtDNA (arrowhead), 7S DNA forming the displacement loop (D-loop; arrow), and mtDNA deletions (square bracket) can be observed. Signals for mtDNAs smaller than the full-length 16.5-kb signal were detected strongly in the frontal lobe of Polg mice at 62 weeks and more subtly at 24 weeks. (B) Overexposed Southern blot analysis of mtDNA in the frontal lobe of Polg and Polg mice in panel A. Modest mtDNA signals (open arrowheads) were detectable in Polg mice, but not in Polg mice. (C) Long-range PCR of the frontal lobe mtDNA. Full-length mtDNA (arrow head) in all mice and deletion molecule size (square bracket) in Polg mice (n = 3) were observed. (D) Short-extension PCR for selective amplification of deletion molecules. Amplicon-derived mtDNA deletions in the frontal lobe were more obvious in Polg mice than Polg mice. (E) Quantitative analysis of accumulation of mtDNA deletions in the frontal lobe using qPCR. Accumulation levels were determined using the D-loop (white), COX1 (gray), or ND4 (black) region of mtDNA as a reference (n = 3, mean ± SD, *P < 0.02, t-test). (F) Quantitative analysis of mtDNA point mutation in the frontal lobe of mice at 62 weeks. Numbers of total mutations (white columns, Welch ANOVA followed by Dunnett’s T3 test) and nonsynonymous mutations (gray columns, one-way ANOVA followed by Tukey’s HSD) are indicated (n = 3, mean ± SD, *P < 0.025). (G) Analysis of mtDNA copy number in the frontal lobe, posterior cortex, basal ganglia, and cerebellum of mice: Polg mice (white columns), Polg mice (gray columns), and Polg mice (black columns). The vertical axis represents the relative value normalized to the average copy number of mtDNA in frontal lobe of Polg mice (n = 3, mean ± SD, **P < 0.01, *P < 0.05, Welch ANOVA followed by the Dunnett’s T3 test). We also investigated mtDNA point mutations in frontal lobe. Polg mice showed significant accumulation of point mutations compared to other mice. Although Polg mice also showed a similar tendency of higher number of mtDNA point mutations than Polg mice, this difference was not statistically significant (Fig. 2F). In addition to point mutations, crucial single nucleotide insertion/deletion were found in six clones from Polg mice. Moreover, Polg mice showed a significantly reduced mtDNA copy number in frontal lobe, posterior cortex, basal ganglia, and cerebellum. No significant difference in mtDNA copy number was observed between Polg and Polg mice (Fig. 2G). Thus, the formation and accumulation of mtDNA deletions, but not point mutations and mtDNA depletion, were detected in Polg mice.

Age-dependent increase in mtDNA deletions is accelerated in muscle and the brain of Polg mice

We investigated mtDNA deletion levels in detail in the brain, which was divided into five areas (frontal lobe, posterior cortex, cerebral cortex except for the frontal lobe, hippocampus, basal ganglia, cerebellum), and in other somatic tissues (heart, liver, kidney, and skeletal muscles) of Polg and Polg mice at 48 weeks of age. Deletions in the heart were clearly detected in all Polg mice by Southern blot analysis (Fig. 3A, upper panel). Deleted mtDNA signals in the frontal lobe, posterior cortex, and hippocampus of Polg mice were detectable after overexposure in Southern blot analysis, same as is shown in Figure 2B, but were not detectable at all in Polg mice (Fig. 3A, lower panel). Consistent with the results of Southern blot analysis, significant differences were verified by short-extension qPCR analysis in the frontal lobe, posterior cortex, and hippocampus, and heart, but not in the cerebellum, liver, kidney, and skeletal muscles at 48 weeks (Fig. 3B). On the other hand, Polg mice indeed showed much higher levels of mtDNA deletions in all tissues we tested (Fig. S4).
Figure 3

Tissue-specific accumulation of mtDNA deletions in Polg mice. (A) Southern blot analysis of accumulation in tissues of Polg and Polg mice (n = 3) at 48 weeks using a probe containing D-loop, a representative result is shown. mtDNA deletions were detected in the heart of Polg mice (open arrowheads) but not in Polg mice. In Polg mice, slight signals of deletion molecules were detectable in the frontal lobe, posterior cortex, and hippocampus of only Polg mice after overexposure (lower panel, arrowheads). (B) qPCR analysis to compare accumulation of mtDNA deletions in the frontal lobe (Fl), posterior cortex (Pc), hippocampus (Hp), basal ganglia (Bg), cerebellum (Cb), heart, liver (Liv), kidney (Kid), and skeletal muscles (Sk) of Polg mice with that of Polg mice at 48 weeks old. Relative accumulation normalized to that in the frontal lobe of Polg mice is represented (n = 3, mean ± SD, **P < 0.01, *P < 0.05, t-test). Significant differences were observed among tissues of Polg mice: Fl and heart > Liv, Kid, and Sk; heart > all brain areas (P < 0.05, Welch ANOVA followed by the Dunnett T3 test). (C) Analysis of age-dependent accumulation of mtDNA deletions in the frontal lobe and skeletal muscles of Polg and Polg mice at 12, 24, 48, 60, 72, 84, and 101 weeks using qPCR. Values are those relative to the average of 12-week-old Polg mice in each tissue. Each circle indicates one mouse (n = 4; two males and two females). Results in other brain areas, heart, and liver are shown in Figure S5. A significant effect of genotype and a significant interaction between genotype and age upon increase in mtDNA deletions was observed in the brain and muscles (P < 0.001, ANCOVA with a factor of genotype and a covariate of age), but not for the liver (P > 0.2). In ANCOVA with a factor of tissues and a covariate of age in each genotype, difference among tissues and the interaction between tissue and age were significant (P < 0.001). Significant differences were detected at several ages, except for in the liver (*P < 0.05). Significant effects of age were observed in all tissues regardless of genotype (P < 1.00 × 10−5, ANCOVA with a factor of genotype and a covariate of age).

Tissue-specific accumulation of mtDNA deletions in Polg mice. (A) Southern blot analysis of accumulation in tissues of Polg and Polg mice (n = 3) at 48 weeks using a probe containing D-loop, a representative result is shown. mtDNA deletions were detected in the heart of Polg mice (open arrowheads) but not in Polg mice. In Polg mice, slight signals of deletion molecules were detectable in the frontal lobe, posterior cortex, and hippocampus of only Polg mice after overexposure (lower panel, arrowheads). (B) qPCR analysis to compare accumulation of mtDNA deletions in the frontal lobe (Fl), posterior cortex (Pc), hippocampus (Hp), basal ganglia (Bg), cerebellum (Cb), heart, liver (Liv), kidney (Kid), and skeletal muscles (Sk) of Polg mice with that of Polg mice at 48 weeks old. Relative accumulation normalized to that in the frontal lobe of Polg mice is represented (n = 3, mean ± SD, **P < 0.01, *P < 0.05, t-test). Significant differences were observed among tissues of Polg mice: Fl and heart > Liv, Kid, and Sk; heart > all brain areas (P < 0.05, Welch ANOVA followed by the Dunnett T3 test). (C) Analysis of age-dependent accumulation of mtDNA deletions in the frontal lobe and skeletal muscles of Polg and Polg mice at 12, 24, 48, 60, 72, 84, and 101 weeks using qPCR. Values are those relative to the average of 12-week-old Polg mice in each tissue. Each circle indicates one mouse (n = 4; two males and two females). Results in other brain areas, heart, and liver are shown in Figure S5. A significant effect of genotype and a significant interaction between genotype and age upon increase in mtDNA deletions was observed in the brain and muscles (P < 0.001, ANCOVA with a factor of genotype and a covariate of age), but not for the liver (P > 0.2). In ANCOVA with a factor of tissues and a covariate of age in each genotype, difference among tissues and the interaction between tissue and age were significant (P < 0.001). Significant differences were detected at several ages, except for in the liver (*P < 0.05). Significant effects of age were observed in all tissues regardless of genotype (P < 1.00 × 10−5, ANCOVA with a factor of genotype and a covariate of age). To understand the effect of age on accumulation of multiple mtDNA deletions, we measured mtDNA deletion levels in each brain region, muscles, and liver in Polg and Polg mice of various ages (Figs. 3C and S5). mtDNA deletions accumulated with age in an exponential manner regardless of tissues or genotypes. However, there was a significant interaction between genotype and age; the heterozygous Polg mutation accelerated the age-dependent increase in mtDNA deletions in the brain and muscles, including the cerebellum and skeletal muscles, but not the liver. In contrast, mtDNA copy number was not affected by age or genotype, whereas a significant difference was found between tissues (Fig. S6). Although the increase in mtDNA deletion was not detected until 60 weeks in mtDNA analysis utilizing the entire skeletal muscle in hind limb, a part of skeletal muscle of hind limb of Polg mice showed the significant enhancement of accumulation of mtDNA deletions at 37 weeks corresponding period of the rotarod test (Fig. S7). Furthermore, a significant decrease in complex IV (COX) activities was observed in skeletal muscles of Polg mice at 96 weeks (Fig. S8) similar to that in cortex of Polg mice in previous report.37 In neural stem cells (NSCs) cultured for 5 weeks from mouse embryos, no difference was observed between NSCs from Polg mice and those from Polg mice, although NSCs from Polg mice accumulated mtDNA deletions (Fig. S9). These results suggest that aging plays an important role in the accumulation of mtDNA deletions in the brain of Polg mice.

mtDNA replicates more rapidly in the mouse brain than in the liver

Since mtDNA deletions and point mutations were accumulated in mouse brain which contains nondividing neurons, we estimated the probability that quiescent cells are constantly metabolizing mtDNA and accumulate mtDNA mutations during mtDNA synthesis. To verify the active mtDNA synthesis, we treated primary cultured neurons from wild-type mouse embryos with BrdU for 48 h. We showed that BrdU signals were localized in the mitochondria in the cell bodies and neurites, but not in the nuclei (Fig. 4A), in postmitotic neurons.
Figure 4

(A) Immunofluorescence analysis for the incorporation of BrdU in primary cultures of neurons prepared from mice at E17. After 9 days of culture, neurons exhibiting morphological differentiation with neurite elongations (left panels) were stained with an anti-BrdU antibody (right panels). Localization of BrdU was observed in the mitochondria of cell bodies and neurites (open arrow heads), but not in the nuclei of postmitotic neurons in the presence 10 μmol/L BrdU (lower panels), although no signal was observed in the absence of BrdU (upper panels). Assessment of newly generated mtDNA in the liver (B, D, and F) and brain (C, E, and G) using BrdU. Representative result is shown. (B and C) Southwestern blot analysis of purified mtDNA from the liver and posterior cortex after intraperitoneal injection of BrdU into adult mice. A control sample was applied to normalize the signals on each membrane (lane “C”). (D and E) Southern blot analysis using the same membrane from B and C. Analysis was performed from each injection independently (n = 3). (F and G) Quantification of incorporation of BrdU into mtDNA in the liver and cerebral cortex. The vertical axis represents the relative level of BrdU incorporation into mtDNA to the peak in each experiment. (H) Quantitative analysis of BrdU incorporation into mtDNA in the liver (upper graph) and cerebral cortex (lower graph). In ANCOVA in which a factor of tissue and a covariate of time was applied (n = 3, % mean ± SE), there was a significant effect of tissue (P < 0.05) and time (P < 0.001) as well as a significant interaction between region and time (P < 0.03). The time to reach the half of the maximum level of BrdU incorporation was shorter in the cerebral cortex (2–3 h) of the brain than in the liver (7–8 h).

(A) Immunofluorescence analysis for the incorporation of BrdU in primary cultures of neurons prepared from mice at E17. After 9 days of culture, neurons exhibiting morphological differentiation with neurite elongations (left panels) were stained with an anti-BrdU antibody (right panels). Localization of BrdU was observed in the mitochondria of cell bodies and neurites (open arrow heads), but not in the nuclei of postmitotic neurons in the presence 10 μmol/L BrdU (lower panels), although no signal was observed in the absence of BrdU (upper panels). Assessment of newly generated mtDNA in the liver (B, D, and F) and brain (C, E, and G) using BrdU. Representative result is shown. (B and C) Southwestern blot analysis of purified mtDNA from the liver and posterior cortex after intraperitoneal injection of BrdU into adult mice. A control sample was applied to normalize the signals on each membrane (lane “C”). (D and E) Southern blot analysis using the same membrane from B and C. Analysis was performed from each injection independently (n = 3). (F and G) Quantification of incorporation of BrdU into mtDNA in the liver and cerebral cortex. The vertical axis represents the relative level of BrdU incorporation into mtDNA to the peak in each experiment. (H) Quantitative analysis of BrdU incorporation into mtDNA in the liver (upper graph) and cerebral cortex (lower graph). In ANCOVA in which a factor of tissue and a covariate of time was applied (n = 3, % mean ± SE), there was a significant effect of tissue (P < 0.05) and time (P < 0.001) as well as a significant interaction between region and time (P < 0.03). The time to reach the half of the maximum level of BrdU incorporation was shorter in the cerebral cortex (2–3 h) of the brain than in the liver (7–8 h). Tissue-dependent difference in mtDNA synthesis rate may also contribute to the tissue-dependent accumulation of mtDNA deletions. Thus, we examined differences in mtDNA synthesis between the liver (Fig. 4B, D, and F) and brain (posterior cortex) (Fig. 4C, E, and G) by in vivo mtDNA labeling with BrdUin adult wild-type mice at 8 weeks of age. Incorporation of BrdU (Fig. 4B and C) into mtDNA (Fig. 4D and E) increased over time in the both tissues from an hour or two after the injection (Fig. 4F and G). A significant dependence was observed between tissues over time. The time to reach the half-maximal level of BrdU incorporation (T1/2) was shorter in the brain (posterior cortex) (Fig. 4G and H, ~4 h) than in the liver (Fig. 4F and H, 7–8 h).

Discussion

Despite clinical studies indicating that heterozygous POLG mutations cause CPEO, neuromuscular symptoms and accumulation of mtDNA deletions in Polg mice have not been reported. In this study, we found that a heterozygous mutation of POLG could cause neuromuscular symptoms similar to those found in CPEO patients. Moreover, we showed that the D257A mutation in one allele of the Polg gene was sufficient to cause accumulation of multiple mtDNA deletions in the brain and muscles, but accumulation of mtDNA point mutations and mtDNA copy number reduction is absent or less prominent. It is still controversial whether mtDNA point mutations are increased in the Polg mice.22,27 However, the present results suggest that mtDNA deletions are more prominent than point mutations. In addition to skeletal muscles in posterior crus, we cannot rule out a possibility that accumulations of mtDNA deletions in tissues other than skeletal muscles, such as the posterior cortex, basal ganglia, and heart, affect motor dysfunction of Polg mice, because they already showed significant increase in mtDNA deletions at 24 weeks. In either case, the tissue-specific accumulation of mtDNA deletions was similar to CPEO patients and the worse rotarod performance of Polg mice might be resulted from accumulation of mtDNA deletions. Thus, the Polg mouse could be an animal model of adCPEO, in contrast with the Polg mice that have the systemically premature-aging phenotype derived from excessive mtDNA alterations, including mtDNA depletion and point mutations. Recently, Dai et al. showed that Polg mice performed comparably in the rotarod test to control mice.37 There are several possible explanations for this discrepancy: protocol of rotarod test, analysis methods, genetic back ground, and housing environment. These differences between the previous report and our study could lead to this apparent discrepancy. Among them, housing environment of mice might have impact on the motor dysfunction because mice were kept in cages with a running wheel. Exercise might have become load for muscles. In addition, the genetic background of mice seems to be different: we backcrossed Polg mice into C57BL/6JJcl before a conventional behavioral test battery, whereas Dai and colleagues intercrossed Polg mice in a colony. Clinical heterogeneity of features and different age of onset is observed among patients even within a family of adCPEO carrying an identical mutation in POLG.8,10,11,18 This may also be explained by genetic background and environmental factors. We clearly demonstrated that aging is a critical determinant for accumulation of mtDNA deletions due to Polg mutation. However, other genetic or environmental risk factors associated with disease onset and progression remain unclear. The Polg mouse will be useful for exploring and evaluating these risk factors. There are two explanations for the tissue specificity of adCPEO symptoms due to a POLG mutation. First, the muscles and brain may show functional impairment at relatively low levels of mtDNA deletions, which does not cause dysfunction in other tissues. Second, the muscles and brain may accumulate more mtDNA deletions than other types of tissues. Our data suggest that the latter possibility is more likely as mtDNA deletions preferentially accumulated in the muscles and brain in Polg mice. mtDNA deletions may preferentially accumulate in the muscles and brain because myocytes and neurons are not frequently replaced by newly generated cells. The results of the present study analyzing mtDNA in Polg mice suggest that normal Polg in one allele is sufficient to repair point mutations or to maintain the mtDNA copy number but does not inhibit the formation of deletions during mtDNA synthesis by PolgD257A.38,39 Previous reports did not detect the accumulation of mtDNA deletions in Polg mice.22,23,26–29 This apparent discrepancy may be because different methods were used; Southern blot analysis with labeled whole mtDNA or a large variety of labeled oligonucleotides as a probe was used in previous studies, while the D-loop region that containing the replication origin for the heavy strand of mtDNA was used as a probe in this study. The presence of the D-loop in deleted mtDNAs suggests that the molecules are replicated and amplified, which explains why mtDNA deletions accumulate in an exponential manner along with aging. Indeed, D-loop retaining mtDNAs with deletions replicate more efficiently than full-length mtDNAs.40 Therefore, higher activity of mtDNA synthesis in the brain may contribute at least in part to tissue-specific accumulation of mtDNA deletions. Further studies are needed to understand how mtDNAs containing deletions replicate through the action of normal or mutant Polg or both in the brain subregions of Polg mice and to clarify how pathological accumulation of mtDNA deletions cause chronic progression of neuromuscular symptoms of CPEO.
  40 in total

1.  Human mitochondrial DNA with large deletions repopulates organelles faster than full-length genomes under relaxed copy number control.

Authors:  Francisca Diaz; Maria Pilar Bayona-Bafaluy; Michele Rana; Marialejandra Mora; Huiling Hao; Carlos T Moraes
Journal:  Nucleic Acids Res       Date:  2002-11-01       Impact factor: 16.971

Review 2.  Mitochondrial DNA replication and disease: insights from DNA polymerase γ mutations.

Authors:  Jeffrey D Stumpf; William C Copeland
Journal:  Cell Mol Life Sci       Date:  2010-10-08       Impact factor: 9.261

3.  Low frequency of mtDNA point mutations in patients with PEO associated with POLG1 mutations.

Authors:  Gittan Kollberg; Monica Jansson; Asa Pérez-Bercoff; Atle Melberg; Christopher Lindberg; Elisabeth Holme; Ali-Reza Moslemi; Anders Oldfors
Journal:  Eur J Hum Genet       Date:  2005-04       Impact factor: 4.246

4.  Mutation of POLG is associated with progressive external ophthalmoplegia characterized by mtDNA deletions.

Authors:  G Van Goethem; B Dermaut; A Löfgren; J J Martin; C Van Broeckhoven
Journal:  Nat Genet       Date:  2001-07       Impact factor: 38.330

5.  Behavioral and metabolic characterization of heterozygous and homozygous POLG mutator mice.

Authors:  Ying Dai; Tomas Kiselak; Joanne Clark; Elizabeth Clore; Kangni Zheng; Allen Cheng; Gregory C Kujoth; Tomas A Prolla; Eleftheria Maratos-Flier; David K Simon
Journal:  Mitochondrion       Date:  2013-03-27       Impact factor: 4.160

Review 6.  Diseases caused by nuclear genes affecting mtDNA stability.

Authors:  A Suomalainen; J Kaukonen
Journal:  Am J Med Genet       Date:  2001

7.  Regional variation in mitochondrial DNA copy number in mouse brain.

Authors:  Satoshi Fuke; Mie Kubota-Sakashita; Takaoki Kasahara; Yasufumi Shigeyoshi; Tadafumi Kato
Journal:  Biochim Biophys Acta       Date:  2010-12-08

Review 8.  Mitochondrial diseases in man and mouse.

Authors:  D C Wallace
Journal:  Science       Date:  1999-03-05       Impact factor: 47.728

9.  Do mtDNA deletions drive premature aging in mtDNA mutator mice?

Authors:  Yevgenya Kraytsberg; David K Simon; Douglas M Turnbull; Konstantin Khrapko
Journal:  Aging Cell       Date:  2009-04-22       Impact factor: 9.304

Review 10.  What causes mitochondrial DNA deletions in human cells?

Authors:  Kim J Krishnan; Amy K Reeve; David C Samuels; Patrick F Chinnery; John K Blackwood; Robert W Taylor; Sjoerd Wanrooij; Johannes N Spelbrink; Robert N Lightowlers; Doug M Turnbull
Journal:  Nat Genet       Date:  2008-03       Impact factor: 38.330

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  12 in total

Review 1.  Mitochondrial dynamics and transport in Alzheimer's disease.

Authors:  Padraig J Flannery; Eugenia Trushina
Journal:  Mol Cell Neurosci       Date:  2019-06-16       Impact factor: 4.314

2.  Mapping Adverse Outcome Pathways for Kidney Injury as a Basis for the Development of Mechanism-Based Animal-Sparing Approaches to Assessment of Nephrotoxicity.

Authors:  Angela Mally; Sebastian Jarzina
Journal:  Front Toxicol       Date:  2022-06-15

3.  Zebrafish lacking functional DNA polymerase gamma survive to juvenile stage, despite rapid and sustained mitochondrial DNA depletion, altered energetics and growth.

Authors:  Jennifer J Rahn; Jennifer E Bestman; Krista D Stackley; Sherine S L Chan
Journal:  Nucleic Acids Res       Date:  2015-10-30       Impact factor: 16.971

4.  Depression-like episodes in mice harboring mtDNA deletions in paraventricular thalamus.

Authors:  T Kasahara; A Takata; T M Kato; M Kubota-Sakashita; T Sawada; A Kakita; H Mizukami; D Kaneda; K Ozawa; T Kato
Journal:  Mol Psychiatry       Date:  2015-10-20       Impact factor: 15.992

5.  Novel biallelic mutations in POLG gene: large deletion and missense variant associated with PEO.

Authors:  Kunqian Ji; Chuanzhu Yan; Yan Lin; Jixiang Du; Wei Wang; Hong Ren; Dandan Zhao; Fuchen Liu; Pengfei Lin; Yuying Zhao
Journal:  Neurol Sci       Date:  2021-06-29       Impact factor: 3.307

Review 6.  Mitochondrial dysfunction in psychiatric morbidity: current evidence and therapeutic prospects.

Authors:  Lilach Toker; Galila Agam
Journal:  Neuropsychiatr Dis Treat       Date:  2015-09-24       Impact factor: 2.570

7.  Roles of the mitochondrial replisome in mitochondrial DNA deletion formation.

Authors:  Marcos T Oliveira; Carolina de Bovi Pontes; Grzegorz L Ciesielski
Journal:  Genet Mol Biol       Date:  2020-03-02       Impact factor: 1.771

Review 8.  Mechanisms of replication and repair in mitochondrial DNA deletion formation.

Authors:  Gabriele A Fontana; Hailey L Gahlon
Journal:  Nucleic Acids Res       Date:  2020-11-18       Impact factor: 16.971

9.  Establishment of Quantitative PCR Assays for Active Long Interspersed Nuclear Element-1 Subfamilies in Mice and Applications to the Analysis of Aging-Associated Retrotransposition.

Authors:  Ryota Kuroki; Yui Murata; Satoshi Fuke; Yutaka Nakachi; Jun Nakashima; Gregory C Kujoth; Tomas A Prolla; Miki Bundo; Tadafumi Kato; Kazuya Iwamoto
Journal:  Front Genet       Date:  2020-09-16       Impact factor: 4.599

10.  Unbiased PCR-free spatio-temporal mapping of the mtDNA mutation spectrum reveals brain region-specific responses to replication instability.

Authors:  Emilie Kristine Bagge; Noriko Fujimori-Tonou; Mie Kubota-Sakashita; Takaoki Kasahara; Tadafumi Kato
Journal:  BMC Biol       Date:  2020-10-23       Impact factor: 7.431

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