Literature DB >> 25537200

A DNA dot hybridization model for assessment of bacterial bioburden in orthokeratology lens storage cases.

Ming-Tse Kuo1, Chun-Chih Chien2, Jung Lo1, Chang-Chun Hsiao3, Shin-Ling Tseng1, Yu-Hsuan Lai1, Po-Chiung Fang1, Tsung C Chang4.   

Abstract

PURPOSE: The aim of this study was to evaluate a DNA dot hybridization assay (DHA) for assessing bacterial bioburden in orthokeratology lens (OK) storage cases.
METHODS: Forty-one OK wearers participated in this study. The dot hybridization assay was used to assess the bacterial bioburden of OK after removal and 6-hour soaking in a storage case. Signals of the DHA were standardized after gray image transformation. The correlations between the hybridization intensities of three universal bacteria probes (BP1, BP2, and BP3) and bacterial bioburden determined by culture (colony forming units per milliliter) was analyzed by Pearson's correlation coefficient and receiver operating characteristic plots. In addition, three genus-specific probes for Pseudomonas, Acinetobacter, and Klebsiella were used to detect potentially hazardous bacterial contamination regardless of bacterial viability status.
RESULTS: Among the three universal probes, there were good correlations between probe BP2 (r2 = 0.31, P = 9.5 × 10(-5)) and probe BP3 (r2 = 0.35, P = 3.1 × 10(-5)) with bacterial bioburden, but no correlation was found between probe BP1 and bacterial bioburden (r2 = 0.04, P = 0.11). In 41 samples, one was Pseudomonas-positive by both DHA and culture, while 10 were Pseudomonas-positive by DHA but negative by culture. Furthermore, nine samples tested positive for Acinetobacter (n = 7) and Klebsiella (n = 2) by DHA only.
CONCLUSIONS: The dot hybridization assay provides a novel way to assess the bacterial bioburden of OK storage cases. Lens care quality can be assessed with universal bacteria probes, while potentially hazardous bacterial contamination can be traced with genus-specific probes. Copyright 2015 The Association for Research in Vision and Ophthalmology, Inc.

Entities:  

Keywords:  bacterial bioburden; dot hybridization assay; lens storage case; orthokeratology

Mesh:

Substances:

Year:  2014        PMID: 25537200     DOI: 10.1167/iovs.14-15920

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  5 in total

1.  PCR analysis for assessment of bacterial bioburden in orthokeratology lens cases.

Authors:  Jung Lo; Po-Chiung Fang; Chun-Chih Chien; Chang-Chun Hsiao; Shin-Ling Tseng; Yu-Hsuan Lai; Ming-Tse Kuo
Journal:  Mol Vis       Date:  2016-01-14       Impact factor: 2.367

2.  A dot hybridization assay for the diagnosis of bacterial keratitis.

Authors:  Po-Chiung Fang; Chun-Chih Chien; Hun-Ju Yu; Ren-Wen Ho; Shin-Ling Tseng; Yu-Hsuan Lai; Ming-Tse Kuo
Journal:  Mol Vis       Date:  2017-04-28       Impact factor: 2.367

3.  Bacterial Bioburden Decrease in Orthokeratology Lens Storage Cases After Forewarning: Assessment by the DNA Dot Hybridization Assay.

Authors:  Po-Chiung Fang; Jung Lo; Tsung C Chang; Chun-Chih Chien; Chang-Chun Hsiao; Shin-Ling Tseng; Yu-Hsuan Lai; Ming-Tse Kuo
Journal:  Eye Contact Lens       Date:  2017-05       Impact factor: 2.018

4.  A Genomic Approach to Investigating Ocular Surface Microorganisms: Monitoring Core Microbiota on Eyelid Margin with a Dot hybridization Assay.

Authors:  Ming-Tse Kuo; Tsai-Ling Chao; Shu-Fang Kuo; Chun-Chih Chien; Alexander Chen; Yu-Hsuan Lai; Yu-Ting Huang
Journal:  Int J Mol Sci       Date:  2020-11-05       Impact factor: 5.923

5.  Diagnosing Fungal Keratitis and Simultaneously Identifying Fusarium and Aspergillus Keratitis with a Dot Hybridization Array.

Authors:  Ming-Tse Kuo; Shiuh-Liang Hsu; Huey-Ling You; Shu-Fang Kuo; Po-Chiung Fang; Hun-Ju Yu; Alexander Chen; Chia-Yi Tseng; Yu-Hsuan Lai; Jiunn-Liang Chen
Journal:  J Fungi (Basel)       Date:  2022-01-07
  5 in total

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