Literature DB >> 25535918

Sex- and tissue-specific functions of Drosophila doublesex transcription factor target genes.

Emily Clough1, Erin Jimenez2, Yoo-Ah Kim3, Cale Whitworth4, Megan C Neville5, Leonie U Hempel1, Hania J Pavlou5, Zhen-Xia Chen1, David Sturgill1, Ryan K Dale1, Harold E Smith1, Teresa M Przytycka3, Stephen F Goodwin5, Mark Van Doren2, Brian Oliver1.   

Abstract

Primary sex-determination "switches" evolve rapidly, but Doublesex (DSX)-related transcription factors (DMRTs) act downstream of these switches to control sexual development in most animal species. Drosophila dsx encodes female- and male-specific isoforms (DSX(F) and DSX(M)), but little is known about how dsx controls sexual development, whether DSX(F) and DSX(M) bind different targets, or how DSX proteins direct different outcomes in diverse tissues. We undertook genome-wide analyses to identify DSX targets using in vivo occupancy, binding site prediction, and evolutionary conservation. We find that DSX(F) and DSX(M) bind thousands of the same targets in multiple tissues in both sexes, yet these targets have sex- and tissue-specific functions. Interestingly, DSX targets show considerable overlap with targets identified for mouse DMRT1. DSX targets include transcription factors and signaling pathway components providing for direct and indirect regulation of sex-biased expression.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 25535918      PMCID: PMC4275658          DOI: 10.1016/j.devcel.2014.11.021

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  79 in total

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3.  Biopython: freely available Python tools for computational molecular biology and bioinformatics.

Authors:  Peter J A Cock; Tiago Antao; Jeffrey T Chang; Brad A Chapman; Cymon J Cox; Andrew Dalke; Iddo Friedberg; Thomas Hamelryck; Frank Kauff; Bartek Wilczynski; Michiel J L de Hoon
Journal:  Bioinformatics       Date:  2009-03-20       Impact factor: 6.937

4.  Sex and the single cell. II. There is a time and place for sex.

Authors:  Carmen C Robinett; Alexander G Vaughan; Jon-Michael Knapp; Bruce S Baker
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5.  Germline-dependent gene expression in distant non-gonadal somatic tissues of Drosophila.

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8.  Control of sexual differentiation and behavior by the doublesex gene in Drosophila melanogaster.

Authors:  Elizabeth J Rideout; Anthony J Dornan; Megan C Neville; Suzanne Eadie; Stephen F Goodwin
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9.  Rapid evolution of sex pheromone-producing enzyme expression in Drosophila.

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  47 in total

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2.  Data analysis algorithm for DamID-seq profiling of chromatin proteins in Drosophila melanogaster.

Authors:  Daniil A Maksimov; Petr P Laktionov; Stepan N Belyakin
Journal:  Chromosome Res       Date:  2016-10-21       Impact factor: 5.239

3.  Stable Binding of the Conserved Transcription Factor Grainy Head to its Target Genes Throughout Drosophila melanogaster Development.

Authors:  Markus Nevil; Eliana R Bondra; Katharine N Schulz; Tommy Kaplan; Melissa M Harrison
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4.  Two of the three Transformer-2 genes are required for ovarian development in Aedes albopictus.

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5.  spenito is required for sex determination in Drosophila melanogaster.

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-31       Impact factor: 11.205

6.  A role for triglyceride lipase brummer in the regulation of sex differences in Drosophila fat storage and breakdown.

Authors:  Lianna W Wat; Charlotte Chao; Rachael Bartlett; Justin L Buchanan; Jason W Millington; Hui Ju Chih; Zahid S Chowdhury; Puja Biswas; Vivian Huang; Leah J Shin; Lin Chuan Wang; Marie-Pierre L Gauthier; Maria C Barone; Kristi L Montooth; Michael A Welte; Elizabeth J Rideout
Journal:  PLoS Biol       Date:  2020-01-21       Impact factor: 8.029

7.  Sex-specific regulation of Lgr3 in Drosophila neurons.

Authors:  Geoffrey W Meissner; Shengzhan D Luo; Brian G Dias; Michael J Texada; Bruce S Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-16       Impact factor: 11.205

Review 8.  Recent advances in understanding the mechanisms of sexually dimorphic plasticity: insights from beetle weapons and future directions.

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9.  Genetics on the Fly: A Primer on the Drosophila Model System.

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10.  Female-biased upregulation of insulin pathway activity mediates the sex difference in Drosophila body size plasticity.

Authors:  Jason W Millington; George P Brownrigg; Charlotte Chao; Ziwei Sun; Paige J Basner-Collins; Lianna W Wat; Bruno Hudry; Irene Miguel-Aliaga; Elizabeth J Rideout
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