Literature DB >> 25515220

Electron transfer reduction of the diazirine ring in gas-phase peptide ions. On the peculiar loss of [NH4O] from photoleucine.

Aleš Marek1, Christopher J Shaffer, Robert Pepin, Kristina Slováková, Kenneth J Laszlo, Matthew F Bush, František Tureček.   

Abstract

Electron transfer to gas-phase peptide ions with diazirine-containing amino acid residue photoleucine (L*) triggers diazirine ring reduction followed by cascades of residue-specific radical reactions. Upon electron transfer, substantial fractions of (GL*GGR +2H)(+[Symbol: see text]) cation-radicals undergo elimination of [NH(4)O] radicals and N(2)H(2) molecules from the side chain. The side-chain dissociations are particularly prominent on collisional activation of long-lived (GL*GGR +2H)(+[Symbol: see text]) cation-radicals formed by electron transfer dissociation of noncovalent peptide-18-crown-6-ether ion complexes. The ion dissociation products were characterized by multistage tandem mass spectrometry (MS(n)) and ion mobility measurements. The elimination of [NH(4)O] was elucidated with the help of (2)H, (15) N, and (18)O-labeled peptide ions and found to specifically involve the amide oxygen of the N-terminal residue. The structures, energies, and electronic states of the peptide radical species were elucidated by a combination of near-UV photodissociation experiments and electron structure calculations combining ab initio and density functional theory methods. Electron transfer reaching the ground electronic states of charge reduced (GL*GGR +2H)(+[Symbol: see text]) cation-radicals was found to reduce the diazirine ring. In contrast, backbone N - Cα bond dissociations that represent a 60%-75% majority of all dissociations because of electron transfer are predicted to occur from excited electronic states.

Entities:  

Year:  2014        PMID: 25515220     DOI: 10.1007/s13361-014-1047-0

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  38 in total

1.  Tunable charge tags for electron-based methods of peptide sequencing: design and applications.

Authors:  Magdalena Zimnicka; Christopher L Moss; Thomas W Chung; Renjie Hui; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-23       Impact factor: 3.109

Review 2.  Aliphatic diazirines as photoaffinity probes for proteins: recent developments.

Authors:  Joydip Das
Journal:  Chem Rev       Date:  2011-04-05       Impact factor: 60.622

3.  The early life of a peptide cation-radical. Ground and excited-state trajectories of electron-based peptide dissociations during the first 330 femtoseconds.

Authors:  Christopher L Moss; Wenkel Liang; Xiaosong Li; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2011-12-21       Impact factor: 3.109

4.  Dipole-guided electron capture causes abnormal dissociations of phosphorylated pentapeptides.

Authors:  Christopher L Moss; Thomas W Chung; Jean A Wyer; Steen Brøndsted Nielsen; Preben Hvelplund; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2011-02-26       Impact factor: 3.109

5.  Activated-ion electron transfer dissociation improves the ability of electron transfer dissociation to identify peptides in a complex mixture.

Authors:  Aaron R Ledvina; Nicole A Beauchene; Graeme C McAlister; John E P Syka; Jae C Schwartz; Jens Griep-Raming; Michael S Westphall; Joshua J Coon
Journal:  Anal Chem       Date:  2010-11-09       Impact factor: 6.986

6.  N[bond]C(alpha) bond dissociation energies and kinetics in amide and peptide radicals. Is the dissociation a non-ergodic process?

Authors:  Frantisek Turecek
Journal:  J Am Chem Soc       Date:  2003-05-14       Impact factor: 15.419

7.  Mass shifting and radical delivery with crown ether attachment for separation and analysis of phosphatidylethanolamine lipids.

Authors:  Huong T Pham; Ryan R Julian
Journal:  Anal Chem       Date:  2014-02-27       Impact factor: 6.986

8.  On the mechanism of electron-capture-induced dissociation of peptide dications from 15n-labeling and crown-ether complexation.

Authors:  Anne I S Holm; Preben Hvelplund; Umesh Kadhane; Mikkel Koefoed Larsen; Bo Liu; Steen Brøndsted Nielsen; Subhasis Panja; Jan Mondrup Pedersen; Troels Skrydstrup; Kristian Støchkel; Evan R Williams; Esben S Worm
Journal:  J Phys Chem A       Date:  2007-09-12       Impact factor: 2.781

9.  3-Trifluoromethyl-3-phenyldiazirine. A new carbene generating group for photolabeling reagents.

Authors:  J Brunner; H Senn; F M Richards
Journal:  J Biol Chem       Date:  1980-04-25       Impact factor: 5.157

10.  Electron transfer dissociation of photolabeled peptides. Backbone cleavages compete with diazirine ring rearrangements.

Authors:  Aleš Marek; Robert Pepin; Bo Peng; Kenneth J Laszlo; Matthew F Bush; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2013-04-30       Impact factor: 3.109

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  2 in total

1.  Combining Near-UV Photodissociation with Electron Transfer. Reduction of the Diazirine Ring in a Photomethionine-Labeled Peptide Ion.

Authors:  Christopher J Shaffer; Aleš Marek; Huong T H Nguyen; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2015-04-23       Impact factor: 3.109

2.  Investigation of the Mechanism of Electron Capture and Electron Transfer Dissociation of Peptides with a Covalently Attached Free Radical Hydrogen Atom Scavenger.

Authors:  Chang Ho Sohn; Sheng Yin; Ivory Peng; Joseph A Loo; J L Beauchamp
Journal:  Int J Mass Spectrom       Date:  2015-07-29       Impact factor: 1.986

  2 in total

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