| Literature DB >> 25514206 |
Feng Zhou1, Haoting Sun2, Yuyan Wang3.
Abstract
Porcine bocavirus is a recently discovered virus that infects pigs and is classified within the Bocavirus genus (family Parvoviridae, subfamily Parvovirinae). The viral genome constitutes linear single-stranded DNA and has three open reading frames that encode four proteins: NS1, NP1, VP1, and VP2. There have been more than seven genotypes discovered to date. These genotypes have been classified into three groups based on VP1 sequence. Porcine bocavirus is much more prevalent in piglets that are co-infected with other pathogens than in healthy piglets. The virus can be detected using PCR, loop-mediated isothermal amplification, cell cultures, indirect immunofluorescence, and other molecular virology techniques. Porcine bocavirus has been detected in various samples, including stool, serum, lymph nodes, and tonsils. Because this virus was discovered only five years ago, there are still many unanswered questions that require further research. This review summarizes the current state of knowledge and primary research achievements regarding porcine bocavirus.Entities:
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Year: 2014 PMID: 25514206 PMCID: PMC4276938 DOI: 10.3390/v6124946
Source DB: PubMed Journal: Viruses ISSN: 1999-4915 Impact factor: 5.048
Figure 1Phylogenetic analysis of bocaviruses. The phylogenetic tree was constructed using nearly full-length nucleotide sequences from bocaviruses in GenBank using the MEGA 5.2 software package [31] (neighbor-joining method with 1000 bootstrap replicates). The relationship among the seven PBoV genotypes (clade Porcine bocavirus) and other bocaviruses can be observed from the tree. PBoV has a close relationship with other bocaviruses, such as feline bocavirus and bovine bocavirus.
Major studies that have reported porcine bocavirus discoveries.
| Published Year | First Author | Country | Name | Accession No. |
|---|---|---|---|---|
| 2009 | Blomstrom, A.L. [ | Sweden | PBo-likeV | FJ872544 |
| 2010 | Cheng, W.X. [ | China | PBoV1-CHN | HM053693 |
| PBoV2-CHN | HM053694 | |||
| 6V | HM053672 | |||
| 7V | HM053673 | |||
| 2011 | McKillen, J. [ | Northern Ireland | PBoV3-UK | JF512472 |
| PBoV4-UK | JF512473 | |||
| 2011 | Lau, S.K. [ | China | PBoV3-HK | JF429834 |
| PBoV4-HK | JF429835 | |||
| 2012 | Li, B. [ | China | PBoV5 | JN831651 |
| 2012 | Yang, W.Z. [ | China | PBoV3C | JN681175 |
| 2014 | Wang, E. [ | China | swBoV CH437 | KF360033 |
Figure 2The genome structure of PBoV. The genome of PBoV contains three ORFs that encode four proteins. The sequences for VP1 and VP2 overlap in the genome.
Major epidemiological studies of porcine bocaviruses a.
| Country | Age | Health Condition b | n | Rate (%) | |
|---|---|---|---|---|---|
| Uganda [ | n/g | n/g | 95 | 2.11% | |
| Cameroon [ | piglet | healthy | 50 | 46% | overall |
| USA [ | mixed | mainly E + R | 385 | 58.7% | overall |
| USA c [ | n/g | E + R | 203 | 43.3% | overall |
| China [ | piglet | mainly R + P | 191 | 38.70% | |
| healthy | 41 | 7.30% | |||
| China [ | piglet | healthy | 397 | 12.59% | |
| China [ | pig | healthy | 120 | 39.17% | |
| China [ | mixed | healthy | 340 | 63.20% | |
| 340 | 64.40% | ||||
| China [ | pig | clinically sick | 128 | 30.50% | |
| healthy | 38 | 23.70% | |||
| clinically sick | 128 | 21.90% | |||
| healthy | 38 | 10.50% | |||
| clinically sick | 128 | 38.30% | |||
| healthy | 38 | 44.70% | |||
| China [ | n/g | sick + D | 213 | 18.31% | |
| healthy | 90 | 16.67% | |||
| China [ | piglet | mainly with PMWS + D | 180 | 56.10% | |
| healthy | 78 | 16.70% | |||
| China [ | piglet | healthy | 92 | 57.61% | |
| 92 | 19.60% | ||||
| China [ | piglet | E | 884 | 31.90% | |
| healthy | 266 | 26.32% | |||
| pig | E | 101 | 27.72% | ||
| healthy | 58 | 24.14% | |||
| China [ | mixed | E + R + G + D | 403 | 11.41% | overall |
| Korea [ | mixed | mixed | 920 | 34.9% | overall |
| E + R + G | 351 | 37.8% | overall | ||
| healthy | 679 | 14.9 | overall | ||
| Sweden [ | piglet | with PMWS | 2 | 100% | |
| Sweden [ | piglet | with PMWS | 34 | 88.00% | |
| healthy | 24 | 46.00% | |||
| Northern Ireland [ | piglet | mainly with PMWS | 369 | 8.70% | |
| 369 | 9.50% | ||||
| Romania [ | wild boar | n/g | 470 | 9.14% | |
| 372 | 17.74% | ||||
| Hungary [ | n/g | sick + healthy | 392 | 1.50% | |
| 392 | 4.80% | ||||
| 392 | 1.80% |
Abbreviations: n, number of samples; n/g, not given. a Selection criteria: PubMed search using the key words “bocavirus” and “porcine”. b For sick pigs, several short forms are used: E for enteric symptoms like diarrhea, inappetence; R for respiratory tract symptoms like cough, dyspnea, panting; P for reproductive failure including abortion/stillbirth for sows and low-quality semen for boars; D for deceased or slaughtered; G for general symptoms such as fever, lethargy, wasting, trembling. c In this study, fecal samples were collected from the USA, Mexico and Canada.
Group PBoV1 co-infection in relation to common diarrhea viruses.
| Group | Listed Virus(+) Samples Coinfected with | |
|---|---|---|
| PCV2 (%) | 3.3–83.8 | 37.7 |
| PTTV1 (%) | 73 | n/g |
| PTTV2 (%) | 70.3 | n/g |
| PRRSV (%) | 0–67.6 | 27.3 |
| CSFV (%) | 6.9–34.5 | 20.7 |
| PEDV (%) | 72.6 | 34 |
| PKoV (%) | 72.1 | 32.9 |
| GARV (%) | 9.9 | 41 |
| TGEV (%) | 1 | 66.7 |
Abbreviations: PCV2, porcine circovirus type 2; PTTV, porcine torque teno virus; PRRSV, porcine reproductive and respiratory syndrome virus; CSFV, classical swine fever virus; PEDV, porcine epidemic diarrhea virus; PKoV, porcine kobuvirus; PBoV, porcine bocavirus; GARV, porcine group A rotavirus; TGEV, transmissible gastroenteritis virus. a Four studies are included [39,52,58,59]. b Median number of group PBoV1-positive samples that were found to be coinfected with the listed pathogen. c Median number of samples that tested positive for the listed viruses and were found to be co-infected with group PBoV1.