Literature DB >> 25503804

Synthetic retinal analogues modify the spectral and kinetic characteristics of microbial rhodopsin optogenetic tools.

N AzimiHashemi1, K Erbguth1, A Vogt2, T Riemensperger3, E Rauch4, D Woodmansee5, J Nagpal1, M Brauner6, M Sheves7, A Fiala3, L Kattner4, D Trauner5, P Hegemann2, A Gottschalk8, J F Liewald1.   

Abstract

Optogenetic tools have become indispensable in neuroscience to stimulate or inhibit excitable cells by light. Channelrhodopsin-2 (ChR2) variants have been established by mutating the opsin backbone or by mining related algal genomes. As an alternative strategy, we surveyed synthetic retinal analogues combined with microbial rhodopsins for functional and spectral properties, capitalizing on assays in C. elegans, HEK cells and larval Drosophila. Compared with all-trans retinal (ATR), Dimethylamino-retinal (DMAR) shifts the action spectra maxima of ChR2 variants H134R and H134R/T159C from 480 to 520 nm. Moreover, DMAR decelerates the photocycle of ChR2(H134R) and (H134R/T159C), thereby reducing the light intensity required for persistent channel activation. In hyperpolarizing archaerhodopsin-3 and Mac, naphthyl-retinal and thiophene-retinal support activity alike ATR, yet at altered peak wavelengths. Our experiments enable applications of retinal analogues in colour tuning and altering photocycle characteristics of optogenetic tools, thereby increasing the operational light sensitivity of existing cell lines or transgenic animals.

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Year:  2014        PMID: 25503804     DOI: 10.1038/ncomms6810

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  21 in total

1.  Directed Evolution of a Bright Near-Infrared Fluorescent Rhodopsin Using a Synthetic Chromophore.

Authors:  Lukas Herwig; Austin J Rice; Claire N Bedbrook; Ruijie K Zhang; Antti Lignell; Jackson K B Cahn; Hans Renata; Sheel C Dodani; Inha Cho; Long Cai; Viviana Gradinaru; Frances H Arnold
Journal:  Cell Chem Biol       Date:  2017-03-02       Impact factor: 8.116

Review 2.  Optimizing optogenetic constructs for control over signaling and cell behaviours.

Authors:  P R O'Neill; N Gautam
Journal:  Photochem Photobiol Sci       Date:  2015-07-02       Impact factor: 3.982

Review 3.  Optogenetics at the presynapse.

Authors:  Benjamin R Rost; Jonas Wietek; Ofer Yizhar; Dietmar Schmitz
Journal:  Nat Neurosci       Date:  2022-07-14       Impact factor: 28.771

Review 4.  Rhodopsins: An Excitingly Versatile Protein Species for Research, Development and Creative Engineering.

Authors:  Willem J de Grip; Srividya Ganapathy
Journal:  Front Chem       Date:  2022-06-22       Impact factor: 5.545

5.  Electronic State Mixing Controls the Photoreactivity of a Rhodopsin with all- trans Chromophore Analogues.

Authors:  Madushanka Manathunga; Xuchun Yang; Massimo Olivucci
Journal:  J Phys Chem Lett       Date:  2018-10-23       Impact factor: 6.475

6.  Activation of an Endogenous Opsin 3 Light Receptor Mediates Photo-Relaxation of Pre-Contracting Late Gestation Human Uterine Smooth Muscle Ex Vivo.

Authors:  Peter D Yim; Shunsuke Hyuga; Amy D Wu; William Dan; Joy Y Vink; George Gallos
Journal:  Reprod Sci       Date:  2020-03-12       Impact factor: 2.924

7.  Double Two-State Opsin Model With Autonomous Parameter Inference.

Authors:  Ruben Schoeters; Thomas Tarnaud; Luc Martens; Wout Joseph; Robrecht Raedt; Emmeric Tanghe
Journal:  Front Comput Neurosci       Date:  2021-06-16       Impact factor: 2.380

Review 8.  Light, heat, action: neural control of fruit fly behaviour.

Authors:  David Owald; Suewei Lin; Scott Waddell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-09-19       Impact factor: 6.237

9.  Optogenetic manipulation of cGMP in cells and animals by the tightly light-regulated guanylyl-cyclase opsin CyclOp.

Authors:  Shiqiang Gao; Jatin Nagpal; Martin W Schneider; Vera Kozjak-Pavlovic; Georg Nagel; Alexander Gottschalk
Journal:  Nat Commun       Date:  2015-09-08       Impact factor: 14.919

10.  Shielded Coaxial Optrode Arrays for Neurophysiology.

Authors:  Jeffrey R Naughton; Timothy Connolly; Juan A Varela; Jaclyn Lundberg; Michael J Burns; Thomas C Chiles; John P Christianson; Michael J Naughton
Journal:  Front Neurosci       Date:  2016-06-09       Impact factor: 4.677

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